Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RPS15AP9-201ENST00000439856 381 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AL360271.2-201ENST00000447710 161 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 RNU7-182P-201ENST00000459009 62 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 MTAPP1-201ENST00000489154 819 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AIG1P1-201ENST00000503376 148 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AP004607.1-201ENST00000524456 203 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC010186.2-204ENST00000537668 439 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 HPRT1P3-201ENST00000539521 576 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 MIR4528-201ENST00000577763 90 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC138761.3-201ENST00000579993 334 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC105245.1-201ENST00000581934 244 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC069294.1-201ENST00000608397 350 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 uc_338.11-201ENST00000619132 160 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC012314.7-201ENST00000619693 93 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC024581.2-201ENST00000619986 252 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 AC009161.2-201ENST00000624626 138 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 SEPT14P19-203ENST00000633205 211 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS33AQ96AX1 HSPA8P4-201ENST00000511877 1920 ntBASIC2.7□□□□□ -1.98
VPS33AQ96AX1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC138393.1-203ENST00000327086 343 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 RNU6-181P-201ENST00000363225 107 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 SNORA62.1-201ENST00000364287 154 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 RNU6-282P-201ENST00000365357 103 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 RNU4-48P-201ENST00000365559 182 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 SNORA75-201ENST00000384158 137 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 Y_RNA.553-201ENST00000384670 102 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 MIR1-2-201ENST00000384961 85 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 MIR10A-201ENST00000385043 110 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 FTH1P15-201ENST00000406984 280 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL592148.1-201ENST00000413568 445 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 RPL30P4-201ENST00000429309 333 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 MRPL50P4-201ENST00000446432 475 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 C1DP4-201ENST00000455429 424 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC027673.1-201ENST00000456245 405 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 MRPL42P6-201ENST00000486397 371 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 RNU6-445P-201ENST00000516949 107 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL391840.1-201ENST00000571144 367 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 MIR4775-201ENST00000581168 75 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC010378.1-201ENST00000619270 362 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC011155.2-201ENST00000623202 216 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 SCARNA4-202ENST00000625402 129 ntBASIC2.69□□□□□ -1.98
VPS33AQ96AX1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
VPS33AQ96AX1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 SNORD116-9-201ENST00000384000 95 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 RNU6-72P-201ENST00000384285 79 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 SNORD116-3-201ENST00000384287 95 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 SNORD116-7-201ENST00000384404 95 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 SNORD116-5-201ENST00000384462 95 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 RNU6-456P-201ENST00000384493 107 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 MIR218-1-201ENST00000384999 110 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 RPL21P133-201ENST00000443666 476 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AP000936.2-201ENST00000447151 681 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 OR4R1P-201ENST00000529879 463 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AP002963.1-201ENST00000530590 184 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 AC009163.5-201ENST00000575421 637 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 MIR4444-1-201ENST00000581696 74 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 MIR4444-2-201ENST00000584390 74 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS33AQ96AX1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
VPS33AQ96AX1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms