Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 MIR548F4-201ENST00000408515 105 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 MIR1179-201ENST00000408703 91 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF34Q969K3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF34Q969K3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF34Q969K3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.4□□□□□ -1.71
RNF34Q969K3 COX6B1P7-201ENST00000430845 235 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF34Q969K3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF34Q969K3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.4□□□□□ -1.71
RNF34Q969K3 AC125238.1-201ENST00000448842 249 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 RN7SL691P-201ENST00000494487 301 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 RNU6-764P-201ENST00000516396 105 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AC023442.1-201ENST00000531247 422 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 OR8R1P-201ENST00000543943 764 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 MIR4503-201ENST00000582187 83 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AC020895.1-201ENST00000595362 272 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.4□□□□□ -1.71
RNF34Q969K3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AC068831.7-201ENST00000616954 363 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AC090617.7-201ENST00000623952 126 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 AC119674.1-207ENST00000641355 633 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF34Q969K3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RNF34Q969K3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RNF34Q969K3 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.71
RNF34Q969K3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF34Q969K3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RNF34Q969K3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 Y_RNA.428-201ENST00000384078 102 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 SNORA70C-201ENST00000384538 135 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 RPS29P13-201ENST00000402041 169 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 RAB9AP3-201ENST00000412737 573 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF34Q969K3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF34Q969K3 AL162151.2-201ENST00000448875 158 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 RAB9AP1-201ENST00000449393 573 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 SSXP4-201ENST00000451349 245 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 HMGN2P7-201ENST00000456186 273 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 FO393415.2-201ENST00000480085 343 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF34Q969K3 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 CYCSP29-201ENST00000533731 318 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.39□□□□□ -1.71
RNF34Q969K3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 AL138880.2-201ENST00000616214 239 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.39□□□□□ -1.71
RNF34Q969K3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.39□□□□□ -1.71
RNF34Q969K3 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
RNF34Q969K3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RNF34Q969K3 ADAM3A-203ENST00000461344 2157 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF34Q969K3 AC110491.1-201ENST00000562191 2010 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF34Q969K3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 Y_RNA.557-201ENST00000384680 107 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 BPY2DP-201ENST00000422208 265 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 MRPS18CP6-201ENST00000423587 223 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 MTND3P9-201ENST00000429526 346 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF34Q969K3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF34Q969K3 SNORD116.3-201ENST00000517176 78 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 MIR2116-201ENST00000517221 80 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 AC008269.2-201ENST00000561915 1105 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 VN1R107P-201ENST00000601784 209 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 AC087588.2-201ENST00000617667 426 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 AL445567.2-201ENST00000618935 498 ntBASIC4.38□□□□□ -1.71
RNF34Q969K3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF34Q969K3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF34Q969K3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF34Q969K3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF34Q969K3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF34Q969K3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF34Q969K3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF34Q969K3 Y_RNA.48-201ENST00000362710 103 ntBASIC4.37□□□□□ -1.71
RNF34Q969K3 Y_RNA.80-201ENST00000362996 102 ntBASIC4.37□□□□□ -1.71
RNF34Q969K3 RNU6-942P-201ENST00000363002 107 ntBASIC4.37□□□□□ -1.71
RNF34Q969K3 RNU6-105P-201ENST00000363909 104 ntBASIC4.37□□□□□ -1.71
RNF34Q969K3 RNU6-1280P-201ENST00000365211 107 ntBASIC4.37□□□□□ -1.71
RNF34Q969K3 RNU1-100P-201ENST00000365255 165 ntBASIC4.37□□□□□ -1.71
RNF34Q969K3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms