Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL138976.2-201ENST00000563989 694 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 RPS15AP11-201ENST00000594193 385 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 NIFKP6-201ENST00000598115 845 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC093732.2-201ENST00000607950 274 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC063944.3-201ENST00000609969 533 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC091304.9-201ENST00000612091 226 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC011890.2-201ENST00000613393 294 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC245884.12-201ENST00000615364 59 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC008121.3-201ENST00000618726 433 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AC007494.3-201ENST00000624660 743 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 AL157786.1-207ENST00000627771 695 ntBASIC2.49□□□□□ -2.01
PTP4A1Q93096 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.49□□□□□ -2.01
PTP4A1Q93096 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PTP4A1Q93096 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTP4A1Q93096 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 RNY4P34-201ENST00000364779 95 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 SNORA9-201ENST00000384215 133 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 MIR10A-201ENST00000385043 110 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 SNORA11.1-201ENST00000408133 129 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC079781.2-201ENST00000446424 169 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 MRPL50P4-201ENST00000446432 475 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC126389.1-201ENST00000477436 290 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC022493.1-201ENST00000492984 337 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 RNU2-46P-201ENST00000517038 113 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 OR4R1P-201ENST00000529879 463 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 LRRC34P1-201ENST00000542742 915 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 MIR548AB-201ENST00000584917 84 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 AP001506.1-201ENST00000615444 211 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 FARSBP1-201ENST00000435808 1778 ntBASIC2.48□□□□□ -2.01
PTP4A1Q93096 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTP4A1Q93096 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.48□□□□□ -2.01
PTP4A1Q93096 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTP4A1Q93096 RNU6-1179P-201ENST00000384667 107 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AL139039.1-201ENST00000401900 692 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 CIR1P3-201ENST00000405137 479 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 HMGN1P14-201ENST00000412459 517 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC016831.2-201ENST00000417179 352 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.47□□□□□ -2.01
PTP4A1Q93096 PGBD4P3-201ENST00000440731 581 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC004924.1-201ENST00000480160 781 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC011825.1-201ENST00000484967 388 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC140059.1-201ENST00000489238 361 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC116562.3-201ENST00000506136 177 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC117522.3-201ENST00000507974 584 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.47□□□□□ -2.01
PTP4A1Q93096 RNU6-410P-201ENST00000517006 107 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC068587.5-201ENST00000528506 175 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 MIR3915-201ENST00000578518 97 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AF131215.7-201ENST00000602443 707 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC025165.5-201ENST00000602802 578 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AL670379.4-201ENST00000605279 254 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.47□□□□□ -2.01
PTP4A1Q93096 ATP5A1P2-202ENST00000616464 443 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PTP4A1Q93096 AC025034.2-201ENST00000623264 286 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 U6.114-201ENST00000636407 96 ntBASIC2.47□□□□□ -2.01
PTP4A1Q93096 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTP4A1Q93096 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PTP4A1Q93096 CKAP2P1-201ENST00000555477 2049 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 OR4G2P-201ENST00000328113 903 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 RNU1-91P-201ENST00000364746 163 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 RNU6-487P-201ENST00000365430 104 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 RNU6-72P-201ENST00000384285 79 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AL049545.1-201ENST00000401856 572 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AL133475.1-201ENST00000404414 305 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 RAP1BP3-201ENST00000407180 549 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 RPS6P15-201ENST00000431996 751 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 AL161788.1-201ENST00000441805 169 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 MTCYBP35-201ENST00000503630 1137 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.46□□□□□ -2.02
PTP4A1Q93096 AC109329.1-201ENST00000518744 317 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 RPL7P20-201ENST00000520308 745 ntBASIC2.46□□□□□ -2.02
PTP4A1Q93096 AC118273.2-201ENST00000532092 465 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms