Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNA5SP219-201ENST00000390940 113 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.18□□□□□ -1.74
RTF1Q92541 AL160275.3-201ENST00000423876 471 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AL669831.1-202ENST00000428504 417 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.18□□□□□ -1.74
RTF1Q92541 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 GTF2IP13-201ENST00000438487 386 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 AC087588.1-201ENST00000462203 316 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 SNRPGP3-201ENST00000469405 227 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 RPL27AP5-201ENST00000469428 449 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.18□□□□□ -1.74
RTF1Q92541 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 RNU2-69P-201ENST00000516061 100 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 SNRPGP16-201ENST00000533275 226 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 MIR3921-201ENST00000577308 85 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.18□□□□□ -1.74
RTF1Q92541 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 HSPA8P4-201ENST00000511877 1920 ntBASIC4.18□□□□□ -1.74
RTF1Q92541 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTF1Q92541 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RTF1Q92541 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.17□□□□□ -1.74
RTF1Q92541 MIR422A-201ENST00000362286 90 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RTF1Q92541 MIR514A1-201ENST00000385133 98 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 MIR548K-201ENST00000408406 116 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 AC096664.2-201ENST00000411843 406 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 VN1R36P-201ENST00000414936 291 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 AL354751.2-201ENST00000415471 210 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 RPLP0P7-201ENST00000416050 667 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.17□□□□□ -1.74
RTF1Q92541 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.17□□□□□ -1.74
RTF1Q92541 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.17□□□□□ -1.74
RTF1Q92541 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.17□□□□□ -1.74
RTF1Q92541 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.17□□□□□ -1.74
RTF1Q92541 RPL37P6-201ENST00000460682 294 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.17□□□□□ -1.74
RTF1Q92541 AC012181.1-201ENST00000479895 423 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 AL049830.2-201ENST00000480072 201 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.17□□□□□ -1.74
RTF1Q92541 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.17□□□□□ -1.74
RTF1Q92541 RNA5SP341-201ENST00000516261 117 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 RNU6-256P-201ENST00000516747 97 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 RNU6-1088P-201ENST00000516850 104 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 SNORA25.17-201ENST00000517184 124 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 AC006270.2-201ENST00000578523 652 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
RTF1Q92541 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.17□□□□□ -1.74
RTF1Q92541 POLR3GP2-201ENST00000588366 668 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 uc_338.25-201ENST00000613756 156 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RTF1Q92541 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.17□□□□□ -1.74
RTF1Q92541 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RTF1Q92541 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.16□□□□□ -1.74
RTF1Q92541 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RTF1Q92541 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RTF1Q92541 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RTF1Q92541 SNORA7.2-201ENST00000364446 145 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 Y_RNA.315-201ENST00000365117 102 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.16□□□□□ -1.74
RTF1Q92541 RNU2-37P-201ENST00000410695 177 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 RNU6-55P-201ENST00000411092 107 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 RNU6-954P-201ENST00000411355 107 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 RPL23AP31-201ENST00000456160 467 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 Y_RNA.635-201ENST00000459041 101 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 SNORD19B-201ENST00000459623 84 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 SNORA14.1-201ENST00000516113 141 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 Y_RNA.682-201ENST00000516457 100 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 RNU6-566P-201ENST00000516790 107 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.16□□□□□ -1.74
RTF1Q92541 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.16□□□□□ -1.74
RTF1Q92541 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.16□□□□□ -1.74
RTF1Q92541 MIR15A-201ENST00000607334 83 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 AL355810.1-201ENST00000614629 552 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 AC022418.1-201ENST00000624118 445 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.16□□□□□ -1.74
RTF1Q92541 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RTF1Q92541 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RTF1Q92541 AC010733.2-201ENST00000589496 5702 ntBASIC4.16□□□□□ -1.74
RTF1Q92541 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RTF1Q92541 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.15□□□□□ -1.74
RTF1Q92541 Y_RNA.419-201ENST00000384041 102 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 SNORA7.4-201ENST00000384249 137 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 AL139039.1-201ENST00000401900 692 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 NDUFB4P4-201ENST00000404822 243 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.15□□□□□ -1.75
RTF1Q92541 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.15□□□□□ -1.75
RTF1Q92541 AC005534.2-201ENST00000431047 433 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 TXNP1-201ENST00000441872 371 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 AC107399.1-201ENST00000451226 265 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 snoU13.4-201ENST00000458916 104 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms