Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 ART2BP-201ENST00000453501 499 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL121594.1-201ENST00000475906 575 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 HMGN2P13-201ENST00000476476 274 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC114981.1-201ENST00000503897 678 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 SNORA31.22-201ENST00000517204 135 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 OR5AQ1P-201ENST00000527596 927 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC005951.2-201ENST00000576282 495 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MIR3683-201ENST00000580847 82 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC012065.4-201ENST00000602445 679 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC012443.1-201ENST00000605605 231 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AL031775.1-201ENST00000607014 887 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC108747.1-201ENST00000609508 535 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 MIR6076-201ENST00000617521 113 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 SNHG22-203ENST00000617833 660 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 Z69908.1-201ENST00000622603 247 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC006927.3-201ENST00000638789 384 ntBASIC1.76□□□□□ -2.13
SHROOM3Q8TF72 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC103710.2-202ENST00000641454 2853 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AL391987.6-201ENST00000305671 199 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-500P-201ENST00000362349 107 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 SNORA7.1-201ENST00000363750 139 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-501P-201ENST00000364072 100 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 Y_RNA.234-201ENST00000364409 97 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-660P-201ENST00000364566 109 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-1180P-201ENST00000364935 107 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNY3P13-201ENST00000365542 102 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-637P-201ENST00000384050 107 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 SNORD116-8-201ENST00000384365 95 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-342P-201ENST00000384521 104 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 MIR325-201ENST00000385260 98 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU6-754P-201ENST00000391166 107 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 FCF1P10-201ENST00000407590 479 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RPS15AP38-201ENST00000413110 372 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 TMEM167AP1-201ENST00000423409 219 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 HMGN2P38-201ENST00000423806 265 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC233728.2-201ENST00000425348 757 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AL353777.1-201ENST00000425552 326 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AL365184.2-201ENST00000431139 435 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 HMGB1P27-201ENST00000431429 603 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNU1-123P-201ENST00000458950 160 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RPL30P14-201ENST00000482744 348 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 SNORD59.2-201ENST00000516873 68 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 DEFB108A-201ENST00000530110 222 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC098614.4-201ENST00000607601 462 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AP003122.6-201ENST00000623831 495 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 MIR3974-201ENST00000637126 96 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC233981.2-201ENST00000611524 1614 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 AC092125.1-201ENST00000562568 1995 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.75□□□□□ -2.13
SHROOM3Q8TF72 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 SNORD113-6-201ENST00000363345 75 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RNU6-392P-201ENST00000364926 101 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL356057.2-201ENST00000403318 432 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC078974.1-201ENST00000411597 223 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL451054.2-201ENST00000420896 202 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 UBE2V1P13-201ENST00000436983 439 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 KATNBL1P6-201ENST00000453433 915 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 SSXP1-201ENST00000453640 473 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 BZW1P2-201ENST00000473537 826 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC092991.1-201ENST00000477176 376 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RN7SKP258-201ENST00000517151 304 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RNU6-840P-201ENST00000517275 65 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AP000907.2-201ENST00000530827 353 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC011604.1-201ENST00000545978 196 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms