Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL645944.1-201ENST00000603857 493 ntBASIC4□□□□□ -1.77
NUP43Q8NFH3 AC090132.2-201ENST00000615881 347 ntBASIC4□□□□□ -1.77
NUP43Q8NFH3 FTX_2.1-201ENST00000618816 94 ntBASIC4□□□□□ -1.77
NUP43Q8NFH3 U6.92-201ENST00000636464 89 ntBASIC4□□□□□ -1.77
NUP43Q8NFH3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4□□□□□ -1.77
NUP43Q8NFH3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4□□□□□ -1.77
NUP43Q8NFH3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP43Q8NFH3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4□□□□□ -1.77
NUP43Q8NFH3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AL391987.6-201ENST00000305671 199 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RNA5SP447-201ENST00000363749 119 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RNY1-201ENST00000364228 113 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RPL21P75-201ENST00000396599 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RPL21P28-201ENST00000401418 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 MIR548M-201ENST00000408260 86 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RNU2-71P-201ENST00000411395 189 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AL590556.1-201ENST00000423231 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AL358472.1-201ENST00000431295 329 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RPL23AP24-201ENST00000458203 385 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RPL21P11-201ENST00000461458 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RPL21P39-201ENST00000463605 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC087190.1-201ENST00000484462 480 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC107032.1-201ENST00000485945 480 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC132942.1-201ENST00000486753 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC093591.1-201ENST00000491435 481 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC139453.3-201ENST00000493276 369 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RPL21P16-201ENST00000495531 483 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 SNORA31.6-201ENST00000516241 130 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 SNORA31.19-201ENST00000517079 126 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 RNA5SP290-201ENST00000517133 127 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC104581.2-201ENST00000572227 430 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 MIR4300-201ENST00000581016 96 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AL139395.1-201ENST00000603662 160 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 AC090617.7-201ENST00000623952 126 ntBASIC3.99□□□□□ -1.77
NUP43Q8NFH3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP43Q8NFH3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RNU1-94P-201ENST00000362627 173 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RNU6-227P-201ENST00000362865 103 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RNU6-335P-201ENST00000364563 113 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 U3.13-201ENST00000364804 214 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 MRPL35P1-201ENST00000404272 572 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 AL603910.2-201ENST00000407268 136 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 CYP4F29P-201ENST00000420685 446 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 AL157831.1-201ENST00000426134 473 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 TOMM20P4-201ENST00000427861 435 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RPS29P17-201ENST00000430795 166 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 BX679664.1-201ENST00000434429 253 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 NDUFS5P3-201ENST00000450668 321 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 PRELID3BP1-201ENST00000457142 540 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 AC010285.1-201ENST00000470580 392 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RNA5SP360-201ENST00000516555 118 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RNA5SP73-201ENST00000516744 108 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 DEFB108E-201ENST00000524692 240 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 AP002770.2-201ENST00000543613 532 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 SYF2P1-201ENST00000550658 413 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 MIR376A1-201ENST00000616574 68 ntBASIC3.98□□□□□ -1.77
NUP43Q8NFH3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP43Q8NFH3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.180-201ENST00000363867 113 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 RNU6-280P-201ENST00000364145 104 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.274-201ENST00000364714 101 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.97□□□□□ -1.77
NUP43Q8NFH3 RPL27AP8-201ENST00000424277 446 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms