Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC63Q8NA47 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 SNORA68.1-201ENST00000364537 132 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 SNORA40C-201ENST00000391285 128 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 EEF1A1P41-201ENST00000414667 207 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 MTCYBP5-201ENST00000423752 1135 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 CALM2P2-201ENST00000428512 440 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC112220.1-201ENST00000434628 355 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 VN1R34P-201ENST00000447387 883 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 HMGN2P10-201ENST00000448085 265 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 NANOGNBP1-201ENST00000448444 480 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 CACYBPP2-201ENST00000453625 678 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 RPL23AP70-201ENST00000483361 460 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC022493.1-201ENST00000492984 337 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AL358832.1-201ENST00000497800 389 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 GLYCAM1-201ENST00000546596 285 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC090616.3-201ENST00000582184 217 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 DEFB131E-202ENST00000602581 683 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC024940.5-201ENST00000622889 474 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AL359740.1-201ENST00000624340 592 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 AC093536.2-201ENST00000565257 1406 ntBASIC2.65□□□□□ -1.99
CCDC63Q8NA47 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC63Q8NA47 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 MTND5P26-201ENST00000426018 1752 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 Y_RNA.33-201ENST00000362591 102 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 SET-203ENST00000372688 801 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 SNORA48.5-201ENST00000391143 135 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 GSTA9P-201ENST00000406231 611 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 MTCO2P19-201ENST00000427513 598 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL589823.1-201ENST00000429577 183 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL451074.3-201ENST00000437709 472 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 DNAJC19P4-201ENST00000440115 345 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC009296.1-201ENST00000443146 155 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 DPPA3P1-201ENST00000448050 469 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL162395.1-201ENST00000457882 422 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC073901.1-201ENST00000462471 408 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC107626.1-201ENST00000471084 183 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 RPS3AP17-201ENST00000472594 777 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC023194.1-201ENST00000493084 308 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 RNU6-572P-201ENST00000516724 80 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 SNORA31.19-201ENST00000517079 126 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 MTCYBP33-201ENST00000575007 1130 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AC011471.1-201ENST00000585766 187 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 AL451007.1-201ENST00000595491 289 ntBASIC2.64□□□□□ -1.99
CCDC63Q8NA47 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC63Q8NA47 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC63Q8NA47 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC63Q8NA47 SNORD3E-201ENST00000362899 217 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 RN7SKP226-201ENST00000364912 300 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 RNU4-48P-201ENST00000365559 182 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 RNU6-166P-201ENST00000384371 107 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 AC068050.1-201ENST00000394891 380 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 AL122016.1-201ENST00000403365 367 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 RNU2-9P-201ENST00000410194 145 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 RNU6-387P-201ENST00000411331 105 ntBASIC2.63□□□□□ -1.99
CCDC63Q8NA47 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC63Q8NA47 MTATP6P18-201ENST00000417994 673 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms