Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 FABP5P13-201ENST00000452144 328 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 KLF3P2-201ENST00000465138 268 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AC011005.2-201ENST00000487324 359 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 MRPS33P3-201ENST00000513456 322 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 SNORA3.4-201ENST00000515969 96 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 RNU6-548P-201ENST00000517083 115 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AL157871.3-201ENST00000557231 293 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AC091489.2-201ENST00000566263 604 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AC012213.3-201ENST00000577199 777 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AL356575.1-201ENST00000603008 283 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AC174048.1-201ENST00000603389 144 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 AL645944.1-201ENST00000603857 493 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HDDC3Q8N4P3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 ZNF72P-201ENST00000425869 1908 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AL139276.1-201ENST00000311910 1001 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 RNU6-960P-201ENST00000364056 120 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 SNORA4.3-201ENST00000365564 137 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 RN7SKP158-201ENST00000410453 326 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC092809.3-201ENST00000415453 231 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC009518.2-201ENST00000418056 731 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 HMGN2P3-201ENST00000433603 273 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC119618.1-201ENST00000434191 222 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 HMGN2P5-201ENST00000436882 273 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 CBX3P7-201ENST00000532876 502 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC002400.1-201ENST00000569310 726 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 MIR3118-1-201ENST00000581787 76 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AL355816.2-201ENST00000610049 647 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AL050303.3-201ENST00000613704 284 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC024581.2-201ENST00000619986 252 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC244517.12-201ENST00000623581 663 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 AC006927.3-201ENST00000638789 384 ntBASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.44□□□□□ -2.02
HDDC3Q8N4P3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC138393.1-203ENST00000327086 343 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 RNU5F-6P-201ENST00000362979 116 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 SNORA3A-201ENST00000364113 130 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 RNU6-395P-201ENST00000365662 106 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL365184.2-201ENST00000431139 435 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL008629.1-201ENST00000438615 184 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC124916.1-201ENST00000444020 547 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL590365.1-201ENST00000450788 243 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC003071.1-201ENST00000451219 789 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC112771.1-201ENST00000463581 102 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC068587.2-201ENST00000478386 781 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC109927.2-201ENST00000506416 303 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 Y_RNA.689-201ENST00000516589 107 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC012435.1-202ENST00000568772 240 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 MIR1273C-201ENST00000578669 77 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL138963.2-201ENST00000605137 226 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC105129.3-201ENST00000605455 485 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC046143.2-201ENST00000609789 160 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 AC006020.1-201ENST00000420179 1854 ntBASIC2.43□□□□□ -2.02
HDDC3Q8N4P3 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 HSPE1P11-201ENST00000339579 310 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 SNORA40C-201ENST00000391285 128 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 MRPL42P2-201ENST00000403169 426 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AL353621.1-201ENST00000418219 243 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 MTCO2P17-201ENST00000424336 677 ntBASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.42□□□□□ -2.02
HDDC3Q8N4P3 RPL23AP30-201ENST00000432419 501 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms