Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SIX5Q8N196 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SIX5Q8N196 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SIX5Q8N196 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX5Q8N196 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX5Q8N196 Y_RNA.199-201ENST00000364014 102 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.87□□□□□ -1.63
SIX5Q8N196 AC087477.1-201ENST00000465747 340 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 RN7SL303P-201ENST00000469773 251 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 AC078918.1-201ENST00000498515 228 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 HMGB3P16-201ENST00000508037 287 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 RNU6-406P-201ENST00000516470 107 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 Vault.1-201ENST00000516474 102 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 CYCSP29-201ENST00000533731 318 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 AC120057.2-201ENST00000571520 271 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 MIR5699-201ENST00000578903 90 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 AC005255.1-201ENST00000593748 216 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 AC020895.1-201ENST00000595362 272 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX5Q8N196 AC114781.5-201ENST00000615297 108 ntBASIC4.87□□□□□ -1.63
SIX5Q8N196 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SIX5Q8N196 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.87□□□□□ -1.63
SIX5Q8N196 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SIX5Q8N196 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.87□□□□□ -1.63
SIX5Q8N196 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SIX5Q8N196 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.87□□□□□ -1.63
SIX5Q8N196 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.87□□□□□ -1.63
SIX5Q8N196 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SIX5Q8N196 AC007390.2-201ENST00000606229 3803 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
SIX5Q8N196 AL450345.1-202ENST00000605741 3881 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX5Q8N196 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX5Q8N196 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX5Q8N196 RNU6-600P-201ENST00000362524 99 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 RNU1-94P-201ENST00000362627 173 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 SNORA71.2-201ENST00000364941 134 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 OR1L6-202ENST00000373684 1044 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 RNU6-886P-201ENST00000384319 105 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 RNU6-102P-201ENST00000384485 104 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 SNORD116-20-201ENST00000384529 92 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 RNU1-82P-201ENST00000390851 165 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX5Q8N196 RPL26P27-201ENST00000414397 437 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.86□□□□□ -1.63
SIX5Q8N196 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX5Q8N196 AC140479.3-201ENST00000418944 1126 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 Y_RNA.644-201ENST00000459006 113 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 AP000870.1-201ENST00000472927 406 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 AC022795.1-201ENST00000473808 480 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 RPL30P1-201ENST00000488676 339 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 AC020593.1-201ENST00000507399 299 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.86□□□□□ -1.63
SIX5Q8N196 RNU6-1114P-201ENST00000516022 107 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 Y_RNA.674-201ENST00000516362 113 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.86□□□□□ -1.63
SIX5Q8N196 BRDTP1-201ENST00000605735 677 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 AC091979.2-201ENST00000607514 214 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 FTX_3.1-201ENST00000610451 147 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 AL023881.1-201ENST00000621088 301 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
SIX5Q8N196 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SIX5Q8N196 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
SIX5Q8N196 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SIX5Q8N196 FAM35BP-202ENST00000497389 3337 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SIX5Q8N196 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX5Q8N196 OR14L1P-202ENST00000641545 3009 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX5Q8N196 RNU1-35P-201ENST00000362782 153 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 SNORA73.1-201ENST00000363107 205 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 SNORD63-201ENST00000384262 68 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 MIR607-201ENST00000385241 96 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 RN7SKP267-201ENST00000410381 285 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 RPS12P10-201ENST00000427031 377 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 AL356535.1-201ENST00000440335 398 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 AC243964.1-201ENST00000441814 261 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.85□□□□□ -1.63
SIX5Q8N196 AC026784.1-201ENST00000507986 352 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 RNU6-1282P-201ENST00000516735 96 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 MRPL49P2-201ENST00000521066 465 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.85□□□□□ -1.63
SIX5Q8N196 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX5Q8N196 BX005214.3-202ENST00000619809 325 ntBASIC4.85□□□□□ -1.63
SIX5Q8N196 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
SIX5Q8N196 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SIX5Q8N196 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SIX5Q8N196 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SIX5Q8N196 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX5Q8N196 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SIX5Q8N196 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX5Q8N196 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms