Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RPS4XP8-201ENST00000402039 771 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 RNU2-39P-201ENST00000410604 198 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 MTND1P27-201ENST00000451117 902 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 MTATP6P7-201ENST00000453315 681 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC126389.1-201ENST00000477436 290 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC090096.1-201ENST00000489168 390 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC117522.1-201ENST00000509821 380 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC113155.1-201ENST00000511141 769 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 SCARNA24.1-201ENST00000516465 137 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 RNU6-703P-201ENST00000516946 107 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC009902.1-201ENST00000519351 183 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 NACAP3-201ENST00000552100 481 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AL157871.3-201ENST00000557231 293 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 MIR3167-201ENST00000579623 85 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC174048.1-201ENST00000603389 144 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC064872.1-201ENST00000604823 1072 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AC007938.3-201ENST00000604965 623 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 AL158032.1-201ENST00000605401 106 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 MIR15A-201ENST00000607334 83 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 U6.99-201ENST00000637524 83 ntBASIC2.18□□□□□ -2.06
SKA3Q8IX90 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SKA3Q8IX90 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SKA3Q8IX90 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 U8.8-201ENST00000365399 135 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SKA3Q8IX90 MIR301A-201ENST00000385261 86 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 MIR1302-8-201ENST00000408342 128 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC114491.1-201ENST00000416095 246 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC096649.2-201ENST00000416186 393 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL591704.1-201ENST00000432574 275 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC098826.1-201ENST00000433943 471 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC244505.5-201ENST00000443639 207 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL031659.1-201ENST00000447075 539 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL136380.1-201ENST00000447970 162 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 RPS3P1-201ENST00000456781 192 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC133134.1-201ENST00000466800 359 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 RPL23AP45-201ENST00000476406 468 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC109927.2-201ENST00000506416 303 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 RNU6-123P-201ENST00000516163 102 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 SCARNA17.1-201ENST00000516211 143 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 SCARNA17.2-201ENST00000516334 143 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 RNU6-572P-201ENST00000516724 80 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL356057.1-201ENST00000533798 831 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SKA3Q8IX90 NRBF2P1-201ENST00000587407 859 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC040904.1-201ENST00000590850 223 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC110760.3-201ENST00000598794 467 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AL121992.2-201ENST00000606262 256 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC012409.4-201ENST00000612923 249 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 SCARNA17.4-201ENST00000614296 143 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 SCARNA15.3-201ENST00000626315 122 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 SCARNA4.1-201ENST00000628597 123 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 MIR3199-2-201ENST00000636243 86 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.17□□□□□ -2.06
SKA3Q8IX90 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC010889.1-201ENST00000566193 2666 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 AC005336.3-201ENST00000623833 2679 ntBASIC2.17□□□□□ -2.06
SKA3Q8IX90 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SKA3Q8IX90 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SKA3Q8IX90 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SKA3Q8IX90 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SKA3Q8IX90 RNU6-169P-201ENST00000365336 107 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 SNORA4.3-201ENST00000365564 137 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 SNORA24.1-201ENST00000384401 135 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 MIR518C-201ENST00000384822 101 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 CISD1P1-201ENST00000393907 327 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 RPL17P50-201ENST00000396131 546 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 RNU6-1025P-201ENST00000410629 104 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.16□□□□□ -2.06
SKA3Q8IX90 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.16□□□□□ -2.06
SKA3Q8IX90 MTND1P23-201ENST00000416931 372 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 MTND3P17-201ENST00000416968 344 ntBASIC2.16□□□□□ -2.06
SKA3Q8IX90 C1DP2-201ENST00000418167 426 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms