Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LRRC34P2-201ENST00000514850 553 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 RN7SKP132-201ENST00000516001 208 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC025678.1-201ENST00000567861 338 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 MIR4782-201ENST00000577987 79 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 NRBF2P5-201ENST00000603087 788 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC007621.1-201ENST00000604544 437 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 NUTF2P8-201ENST00000604593 363 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AF250324.2-201ENST00000608299 610 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AC004972.1-201ENST00000623934 2209 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 AL355596.1-201ENST00000565399 3996 ntBASIC3.35□□□□□ -1.87
HERC6Q8IVU3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 MTND5P27-201ENST00000428871 1720 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 MIR22-201ENST00000362190 85 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 RNA5SP184-201ENST00000411071 108 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 FCF1P9-201ENST00000412546 282 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 HSPE1P1-201ENST00000421494 318 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC105272.1-201ENST00000438604 198 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 Z99127.3-201ENST00000448158 395 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 SUMO2P6-201ENST00000505273 288 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 MTND4LP26-201ENST00000518144 282 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC025755.1-201ENST00000521306 278 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AP001094.1-201ENST00000579805 193 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 MTATP6P3-201ENST00000581686 676 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC008752.3-201ENST00000588113 712 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 MTND4LP5-201ENST00000605152 292 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AP001596.2-201ENST00000608410 312 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC099778.2-201ENST00000610904 211 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AL359757.2-201ENST00000624309 274 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HERC6Q8IVU3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.34□□□□□ -1.87
HERC6Q8IVU3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HERC6Q8IVU3 AC008669.1-201ENST00000565823 2178 ntBASIC3.34□□□□□ -1.88
HERC6Q8IVU3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 RNU4-82P-201ENST00000362443 140 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 RNU6-778P-201ENST00000363269 103 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 SNORD67-201ENST00000390833 111 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 SNORD37.1-201ENST00000390968 65 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AL139039.1-201ENST00000401900 692 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC098614.2-201ENST00000426040 255 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC007560.1-201ENST00000426912 237 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 RPL21P41-201ENST00000459863 264 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 HMGB1P30-201ENST00000492455 606 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC139453.3-201ENST00000493276 369 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC019235.1-201ENST00000503847 207 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC079140.5-201ENST00000507882 310 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 SNORA40.12-201ENST00000516329 111 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 RN7SKP219-201ENST00000516825 296 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 RNU6-703P-201ENST00000516946 107 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC104027.1-201ENST00000521887 300 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 U2.21-201ENST00000637295 81 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HERC6Q8IVU3 AC006020.1-201ENST00000420179 1854 ntBASIC3.33□□□□□ -1.88
HERC6Q8IVU3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC062016.1-201ENST00000355719 319 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 MIR412-201ENST00000362142 91 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 Y_RNA.554-201ENST00000384672 102 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 Y_RNA.573-201ENST00000384763 105 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AC068050.1-201ENST00000394891 380 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 MIR548F1-201ENST00000408667 84 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
HERC6Q8IVU3 NUP35P1-201ENST00000422734 947 ntBASIC3.32□□□□□ -1.88
HERC6Q8IVU3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms