Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 Y_RNA.6-201ENST00000362350 114 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 Y_RNA.372-201ENST00000365599 102 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 SNORD70.1-201ENST00000391007 85 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RAP1BP3-201ENST00000407180 549 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RPL7P37-201ENST00000425095 738 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC009296.1-201ENST00000443146 155 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC006026.2-201ENST00000457376 180 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC107626.1-201ENST00000471084 183 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RPL23AP11-201ENST00000475260 469 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC116655.1-201ENST00000508324 901 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MTND3P25-201ENST00000509243 135 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RNU6-581P-201ENST00000516214 105 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RNU6-1281P-201ENST00000516223 105 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MTND4P7-201ENST00000523876 130 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AL157687.1-201ENST00000554853 619 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MIR2682-201ENST00000580305 110 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MIR3941-201ENST00000582572 103 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC012119.1-201ENST00000603184 222 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AL162413.1-201ENST00000603198 110 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC091152.3-201ENST00000604227 325 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AF250324.2-201ENST00000608299 610 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 Z82243.1-201ENST00000609432 473 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC084782.3-201ENST00000612282 578 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 AC138915.1-201ENST00000565427 1685 ntBASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
LRRTM4Q86VH4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.15□□□□□ -1.9
LRRTM4Q86VH4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LRRTM4Q86VH4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
LRRTM4Q86VH4 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNU6-192P-201ENST00000391253 100 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNU6-607P-201ENST00000411283 108 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC016831.2-201ENST00000417179 352 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 PRPS1P1-201ENST00000445305 876 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNU7-180P-201ENST00000459240 63 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC010401.1-201ENST00000463867 348 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 MTAPP1-201ENST00000489154 819 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RN7SL504P-201ENST00000494496 287 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 MTCO3P9-201ENST00000506989 781 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNA5SP401-201ENST00000515920 127 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNU4-29P-201ENST00000515943 174 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNU1-86P-201ENST00000516108 154 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 RNU1-107P-201ENST00000516617 154 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 TPRKBP2-201ENST00000565969 475 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AL161756.2-201ENST00000604597 246 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC004492.1-201ENST00000607036 742 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 U2.17-201ENST00000611454 95 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 uc_338.25-201ENST00000613756 156 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LRRTM4Q86VH4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 Y_RNA.9-201ENST00000362354 101 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 RNU6-1083P-201ENST00000384022 107 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 Y_RNA.480-201ENST00000384364 102 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 RNU6-748P-201ENST00000384648 107 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 MIR491-201ENST00000384877 84 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 RNU6-780P-201ENST00000391030 104 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 AL512633.1-201ENST00000399931 655 ntBASIC3.14□□□□□ -1.91
LRRTM4Q86VH4 RPS4XP7-201ENST00000406274 780 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms