Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL451054.2-201ENST00000420896 202 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC007283.2-201ENST00000424739 197 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RPL7P37-201ENST00000425095 738 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC108667.1-201ENST00000428618 249 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AL714022.1-201ENST00000439897 151 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 MTND6P13-201ENST00000443510 523 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AL033528.1-201ENST00000453780 140 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RNU6-956P-201ENST00000458868 103 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 RPS27P26-201ENST00000494583 239 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC138853.1-201ENST00000503549 823 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC010587.1-201ENST00000505809 469 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC022447.1-201ENST00000515358 464 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AK6P1-201ENST00000540219 478 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC005771.1-201ENST00000585581 349 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC091304.9-201ENST00000612091 226 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 uc_338.12-201ENST00000616344 181 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC009090.3-201ENST00000616553 565 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 AC090582.1-201ENST00000636321 199 ntBASIC2.92□□□□□ -1.94
NPHP3Q7Z494 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 U8.3-201ENST00000363321 132 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 RNY4P34-201ENST00000364779 95 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 U8.8-201ENST00000365399 135 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 RNU2-33P-201ENST00000410344 192 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AL513331.1-201ENST00000411908 397 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AC092047.1-201ENST00000424997 240 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 ZNF863P-201ENST00000426746 417 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 SNORD42A-201ENST00000459584 64 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 RAP1BP2-201ENST00000478270 544 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AC009901.1-201ENST00000506703 541 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 RPL23AP78-201ENST00000599928 470 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AC087752.4-201ENST00000605911 462 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.91□□□□□ -1.94
NPHP3Q7Z494 snoU13.31-201ENST00000607291 104 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AC245008.1-201ENST00000608123 476 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 AC010678.1-201ENST00000614118 713 ntBASIC2.91□□□□□ -1.94
NPHP3Q7Z494 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NPHP3Q7Z494 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.9□□□□□ -1.94
NPHP3Q7Z494 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
NPHP3Q7Z494 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.9□□□□□ -1.94
NPHP3Q7Z494 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
NPHP3Q7Z494 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 RNU5E-1-201ENST00000362477 120 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 RNU6-217P-201ENST00000384164 104 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 RNA5SP181-201ENST00000410246 98 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AL096701.2-201ENST00000416920 238 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 MTCO2P34-201ENST00000421994 607 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC009414.1-201ENST00000427200 443 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC104332.2-201ENST00000429959 156 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 GAPDHP17-201ENST00000449858 1001 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC233279.1-201ENST00000455300 423 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 RNU7-23P-201ENST00000459465 62 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC105313.1-201ENST00000509121 353 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 CDC42P4-201ENST00000510507 563 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 Y_RNA.672-201ENST00000516289 104 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AP002453.2-201ENST00000533503 320 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 ARL2BPP2-201ENST00000550907 489 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC137800.2-201ENST00000574375 120 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 NBR2-204ENST00000587322 63 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC040904.1-201ENST00000590850 223 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 DPPA3P3-201ENST00000603842 430 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AL161729.4-201ENST00000604650 476 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC098614.4-201ENST00000607601 462 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.9□□□□□ -1.95
NPHP3Q7Z494 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AP003399.1-201ENST00000637534 361 ntBASIC2.9□□□□□ -1.95
NPHP3Q7Z494 AC008669.1-201ENST00000565823 2178 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 Y_RNA.359-201ENST00000365498 102 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 SNORA75-201ENST00000384158 137 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 RPS3AP36-201ENST00000398190 775 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 MRPL42P2-201ENST00000403169 426 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AL359634.1-202ENST00000404721 284 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 RNU2-36P-201ENST00000410361 191 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 RNU6-248P-201ENST00000410720 107 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 BTF3L4P1-201ENST00000413813 468 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AL365496.1-201ENST00000426885 215 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHP3Q7Z494 AC104850.1-201ENST00000435940 476 ntBASIC2.89□□□□□ -1.95
NPHP3Q7Z494 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms