Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 NIFKP6-201ENST00000598115 845 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 AC007349.4-201ENST00000608114 532 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 AP000238.1-201ENST00000608759 426 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 RNU6-730P-201ENST00000383954 104 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 RNU6-1083P-201ENST00000384022 107 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 MIR325-201ENST00000385260 98 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 AC098934.3-201ENST00000430450 190 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 AC245047.4-201ENST00000433189 144 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 MTND4LP5-201ENST00000605152 292 ntBASIC0.75□□□□□ -2.29
RGPD4Q7Z3J3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RGPD4Q7Z3J3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.74□□□□□ -2.29
RGPD4Q7Z3J3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.74□□□□□ -2.29
RGPD4Q7Z3J3 RPS27P23-201ENST00000487608 251 ntBASIC0.74□□□□□ -2.29
RGPD4Q7Z3J3 AL391261.3-201ENST00000557194 520 ntBASIC0.74□□□□□ -2.29
RGPD4Q7Z3J3 RPL37P10-201ENST00000412884 288 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 MTND4P8-201ENST00000514997 1362 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 AC010738.1-201ENST00000604970 987 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 AC104763.3-201ENST00000613765 618 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 Y_RNA.67-201ENST00000362870 100 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 Y_RNA.280-201ENST00000364765 112 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 SNORA22-201ENST00000383907 134 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 SNORA22C-201ENST00000384614 134 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 RNU6-775P-201ENST00000459318 96 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 SNORA62.5-201ENST00000516634 120 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 AC005668.1-201ENST00000571142 476 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 MIR8074-201ENST00000615081 81 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 AL136313.1-201ENST00000624804 202 ntBASIC0.73□□□□□ -2.29
RGPD4Q7Z3J3 MIR561-201ENST00000385216 97 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 RSU1P2-202ENST00000437884 485 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AC097499.1-201ENST00000444277 208 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AC104629.2-201ENST00000468627 598 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AC010900.2-201ENST00000604508 210 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AC090116.1-201ENST00000615679 446 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 AC073308.1-201ENST00000623696 305 ntBASIC0.72□□□□□ -2.29
RGPD4Q7Z3J3 Y_RNA.274-201ENST00000364714 101 ntBASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 SSXP10-201ENST00000402595 565 ntBASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 AC009310.1-201ENST00000414414 451 ntBASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 TOMM22P2-201ENST00000430735 237 ntBASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 AC109927.2-201ENST00000506416 303 ntBASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 AC087821.2-201ENST00000637086 450 ntBASIC0.71□□□□□ -2.3
RGPD4Q7Z3J3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 RNU6-35P-201ENST00000384530 107 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 TAF9BP2-201ENST00000400856 499 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC099513.1-201ENST00000490423 301 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC105224.1-201ENST00000587055 421 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC012669.1-201ENST00000603209 283 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC008945.2-201ENST00000606056 604 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC013468.1-201ENST00000608680 598 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 MIR5739-201ENST00000619803 80 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC005832.2-201ENST00000538921 1430 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 MIR424-201ENST00000362227 98 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 RNU6-98P-201ENST00000384173 107 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 RNU6-750P-201ENST00000390946 107 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 DSTNP4-201ENST00000399472 474 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 ARPC3P5-201ENST00000448802 534 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 MRPS17P3-201ENST00000465453 385 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 SNORA31.22-201ENST00000517204 135 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 DUXAP1-201ENST00000556632 463 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AL512506.2-201ENST00000624472 458 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 Z69720.2-201ENST00000624755 279 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 MTND5P30-201ENST00000452896 1731 ntBASIC0.7□□□□□ -2.3
RGPD4Q7Z3J3 AL049641.1-201ENST00000441055 1948 ntBASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 RNU1-36P-201ENST00000365130 165 ntBASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 AL449283.1-202ENST00000418249 604 ntBASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 AC112492.4-201ENST00000456549 352 ntBASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 RNU6-1095P-201ENST00000516148 108 ntBASIC0.69□□□□□ -2.3
RGPD4Q7Z3J3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms