Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SNORA23-201ENST00000365128 182 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 SNORD70.1-201ENST00000391007 85 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC092809.3-201ENST00000415453 231 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC113618.1-201ENST00000416747 285 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 ATG3P1-201ENST00000419507 911 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC099677.1-201ENST00000420575 175 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 CALM2P2-201ENST00000428512 440 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC097713.2-201ENST00000430199 356 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC234775.1-201ENST00000454247 670 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC034236.1-201ENST00000469891 373 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 TRBV1-201ENST00000476502 284 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AP001086.1-201ENST00000494882 321 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RPL23AP55-201ENST00000498163 452 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RPS27P27-201ENST00000498779 255 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC008526.1-201ENST00000509149 338 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 MTCYBP40-201ENST00000509390 1135 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC023141.12-201ENST00000512399 199 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RNU2-69P-201ENST00000516061 100 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 SNORA31.22-201ENST00000517204 135 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RANP3-201ENST00000530970 276 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC018630.1-201ENST00000541376 925 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 MIR5047-201ENST00000579212 100 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 MIR5692C1-201ENST00000585309 91 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC008737.2-201ENST00000599446 118 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AP000654.2-201ENST00000605633 586 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC092628.2-201ENST00000622492 339 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 AC091903.1-201ENST00000624322 454 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 U6.105-201ENST00000637379 88 ntBASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF549Q6P9A3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 SNORA71.3-201ENST00000362582 128 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 SNORD6-201ENST00000365444 73 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.482-201ENST00000384377 111 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 MIR183-201ENST00000384958 110 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC244098.2-201ENST00000422068 99 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 RPL7P37-201ENST00000425095 738 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 YME1L1P1-201ENST00000429435 297 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC104058.1-201ENST00000448028 297 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC087884.1-201ENST00000469738 328 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC117503.1-201ENST00000472241 394 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC021146.2-201ENST00000504736 556 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC079140.5-201ENST00000507882 310 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 SMURF2P1-201ENST00000514992 481 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC026801.2-201ENST00000515352 425 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 SNORA31.3-201ENST00000516029 96 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 MIR3944-201ENST00000581277 108 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC024220.1-201ENST00000603675 484 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 CYP2C61P-201ENST00000604072 290 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 AC007998.5-201ENST00000622938 237 ntBASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF549Q6P9A3 MTND5P19-201ENST00000424872 1794 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.5-201ENST00000362334 102 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.28-201ENST00000362554 111 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 Y_RNA.144-201ENST00000363521 113 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 RNU6-715P-201ENST00000365204 103 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 RNU6-310P-201ENST00000384655 107 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 MIR450B-201ENST00000401182 78 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AL137014.1-201ENST00000420490 1226 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AL358176.2-201ENST00000425769 204 ntBASIC3.18□□□□□ -1.9
ZNF549Q6P9A3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms