Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MIR4299-201ENST00000577899 72 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AL161423.1-201ENST00000613700 262 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 AC104763.3-201ENST00000613765 618 ntBASIC0.29□□□□□ -2.36
RIF1Q5UIP0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 MIR601-201ENST00000385256 79 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC013410.2-201ENST00000422627 201 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC067940.1-201ENST00000458411 300 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC104108.1-201ENST00000509930 412 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 RNU6-889P-201ENST00000517189 103 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC093838.1-201ENST00000613014 469 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 MIR101-1-201ENST00000362265 75 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC097463.2-201ENST00000421074 142 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 ANKRD26P4-201ENST00000455755 950 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 SNORA44.1-201ENST00000517031 108 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
RIF1Q5UIP0 MIR548AX-201ENST00000580117 73 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AL669831.4-202ENST00000590817 238 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
RIF1Q5UIP0 RNU4-32P-201ENST00000363404 141 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 Y_RNA.475-201ENST00000384345 101 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 RN7SKP142-201ENST00000411236 328 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 RNU6-1004P-201ENST00000516584 111 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 SNORA48.10-201ENST00000516965 160 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 RNU6-833P-201ENST00000363486 107 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 MIR938-201ENST00000401216 83 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 RNU6-575P-201ENST00000411326 105 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 RPL7P29-201ENST00000437151 728 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 AC087477.1-201ENST00000465747 340 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 AP001025.1-201ENST00000486139 332 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 HMGB1P22-201ENST00000505315 124 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.27□□□□□ -2.37
RIF1Q5UIP0 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 AC141557.1-201ENST00000540982 400 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 HSPE1P19-201ENST00000603327 295 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
RIF1Q5UIP0 U3.13-201ENST00000364804 214 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 RNU6-119P-201ENST00000364882 107 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 RNU4-9P-201ENST00000364951 139 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 UBE2V2P3-201ENST00000433562 437 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC241584.1-201ENST00000438469 1241 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 MTND2P13-201ENST00000577438 1039 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC008759.3-201ENST00000613300 508 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL121890.5-201ENST00000620848 304 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 RNU4-7P-201ENST00000364758 141 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 RPS3AP24-201ENST00000407896 734 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 RPS3AP37-201ENST00000419176 745 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL590556.1-201ENST00000423231 483 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 EIF4EP4-201ENST00000424916 578 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 NDUFB4P10-201ENST00000452541 359 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL157398.1-201ENST00000452981 186 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 MRPS36P2-201ENST00000512569 299 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AL158211.1-201ENST00000566763 763 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.26□□□□□ -2.37
RIF1Q5UIP0 AC018755.4-201ENST00000619715 454 ntBASIC0.26□□□□□ -2.37
RIF1Q5UIP0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 EDDM3CP-201ENST00000415977 425 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AL354941.1-201ENST00000438600 464 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 Y_RNA.684-201ENST00000516510 99 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 RNA5SP165-201ENST00000517142 115 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AP004371.1-201ENST00000525240 214 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AC012414.6-201ENST00000568241 401 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 uc_338.6-201ENST00000613544 171 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
RIF1Q5UIP0 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 RPL21P32-201ENST00000419877 477 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 RPS27AP8-201ENST00000452665 445 ntBASIC0.25□□□□□ -2.37
RIF1Q5UIP0 RPL23AP54-201ENST00000495129 419 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms