Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 OR1M4P-201ENST00000589199 287 ntBASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 AL133255.1-201ENST00000606374 441 ntBASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 ATP5A1P2-202ENST00000616464 443 ntBASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 AC058791.1-201ENST00000608412 3198 ntBASIC3.62□□□□□ -1.83
KHDC1Q4VXA5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AP001486.2-201ENST00000561652 5113 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 RNU6-1329P-201ENST00000365664 107 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 Y_RNA.482-201ENST00000384377 111 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 ATP5A1P2-201ENST00000412323 255 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AL096701.2-201ENST00000416920 238 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC007560.1-201ENST00000426912 237 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AL645568.3-201ENST00000433683 316 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 BX679664.1-201ENST00000434429 253 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AL078601.1-201ENST00000444542 271 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 MTATP6P7-201ENST00000453315 681 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC006539.3-201ENST00000454258 129 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC130509.1-201ENST00000464158 433 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 RN7SL442P-201ENST00000473804 320 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC096745.1-201ENST00000509945 370 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC104619.4-201ENST00000510773 249 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC092436.3-201ENST00000511788 257 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 SNORA70.18-201ENST00000516696 98 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AP005597.4-201ENST00000526762 229 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AL355598.1-201ENST00000604169 202 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 AL359757.2-201ENST00000624309 274 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 U2.21-201ENST00000637295 81 ntBASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
KHDC1Q4VXA5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 SNORD9-201ENST00000362566 104 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 Y_RNA.259-201ENST00000364619 101 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 RNU6-593P-201ENST00000364716 112 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 XGY1-201ENST00000381172 446 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 Y_RNA.419-201ENST00000384041 102 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 MIR34A-201ENST00000385130 110 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 RPS4XP3-201ENST00000398541 413 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 MIR888-201ENST00000401186 77 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 DBIP2-201ENST00000419076 262 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 MTCO2P27-201ENST00000420740 428 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 RPS4XP22-201ENST00000480755 780 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 RPL7P47-201ENST00000497299 556 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 HMGN1P11-201ENST00000508668 303 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 SNORA70.14-201ENST00000516205 110 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC126177.8-201ENST00000618339 1015 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC010378.1-201ENST00000619270 362 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC034229.5-201ENST00000624258 185 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 MIR7153-201ENST00000637758 57 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 OTUD4P1-201ENST00000237841 3067 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
KHDC1Q4VXA5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 Y_RNA.315-201ENST00000365117 102 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 AL359837.1-201ENST00000381357 287 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 RNU6-95P-201ENST00000384697 107 ntBASIC3.59□□□□□ -1.83
KHDC1Q4VXA5 MIR10A-201ENST00000385043 110 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 327.5 ms