Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-1284P-201ENST00000363701 100 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-14P-201ENST00000384630 106 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 GSTA9P-201ENST00000406231 611 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RNU2-62P-201ENST00000410868 191 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RPS15AP5-201ENST00000436276 388 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RPS27AP8-201ENST00000452665 445 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 TRBV1-201ENST00000476502 284 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 MTND1P22-201ENST00000510572 951 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RNA5SP337-201ENST00000517007 109 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RNA5SP165-201ENST00000517142 115 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AP003467.2-201ENST00000520175 319 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 OR4R1P-201ENST00000529879 463 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 RANP3-201ENST00000530970 276 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC009127.3-201ENST00000570531 403 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AL356575.1-201ENST00000603008 283 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AL161798.1-201ENST00000604630 131 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC007363.1-201ENST00000604736 620 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC025754.2-201ENST00000606491 432 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 AC009878.1-201ENST00000621819 340 ntBASIC2.6□□□□□ -1.99
SHROOM1Q2M3G4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 RNU4-21P-201ENST00000362802 126 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-750P-201ENST00000390946 107 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 SNORD115.1-201ENST00000391109 76 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AF274854.1-201ENST00000413236 615 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 RAC1P6-201ENST00000423911 575 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC104651.1-201ENST00000427559 735 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC119618.1-201ENST00000434191 222 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 MTND1P28-201ENST00000435623 950 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC013267.1-201ENST00000458227 267 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC107626.1-201ENST00000471084 183 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC026801.1-201ENST00000497178 464 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 TBCAP3-201ENST00000512475 312 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 IGLV3-17-201ENST00000519099 244 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC022878.1-201ENST00000530684 149 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 SNRPGP18-201ENST00000553000 214 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC009977.1-201ENST00000586015 570 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 RNU6-87P-201ENST00000607561 108 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC012360.2-201ENST00000609349 391 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 HMGB1P24-202ENST00000615653 685 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC008147.4-201ENST00000617570 1204 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC092140.2-201ENST00000618027 521 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC010378.1-201ENST00000619270 362 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 AC022079.1-201ENST00000621546 602 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 CU459211.1-201ENST00000635667 749 ntBASIC2.59□□□□□ -1.99
SHROOM1Q2M3G4 MTND4P4-201ENST00000439033 1366 ntBASIC2.59□□□□□ -2
SHROOM1Q2M3G4 MTND5P30-201ENST00000452896 1731 ntBASIC2.59□□□□□ -2
SHROOM1Q2M3G4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AL139276.1-201ENST00000311910 1001 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AL049545.1-201ENST00000401856 572 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 MRPL42P2-201ENST00000403169 426 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 RNU2-2P-201ENST00000410396 191 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 RNU6-195P-201ENST00000411352 109 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 ELOCP14-201ENST00000428070 331 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 HMGB1P27-201ENST00000431429 603 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 SNRPEP9-201ENST00000436794 238 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 ELOCP7-201ENST00000439968 331 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 SNRPGP9-201ENST00000456025 225 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC139453.3-201ENST00000493276 369 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC105252.1-201ENST00000503089 286 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 FABP5P5-201ENST00000515537 406 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
SHROOM1Q2M3G4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms