Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AL160314.1-201ENST00000490836 438 ntBASIC2.12□□□□□ -2.07
SMARCB1Q12824 AF131216.2-201ENST00000512316 564 ntBASIC2.12□□□□□ -2.07
SMARCB1Q12824 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 AL022161.1-201ENST00000604390 213 ntBASIC2.12□□□□□ -2.07
SMARCB1Q12824 AC135507.1-201ENST00000607214 561 ntBASIC2.12□□□□□ -2.07
SMARCB1Q12824 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SMARCB1Q12824 MIR7844-201ENST00000616161 122 ntBASIC2.12□□□□□ -2.07
SMARCB1Q12824 uc_338.12-201ENST00000616344 181 ntBASIC2.12□□□□□ -2.07
SMARCB1Q12824 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SMARCB1Q12824 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 RNU6-778P-201ENST00000363269 103 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 RNU6-1284P-201ENST00000363701 100 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 RNU6-512P-201ENST00000364438 103 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 SMIM11P1-201ENST00000369586 178 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 RNU6-701P-201ENST00000384059 107 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 RNU6-533P-201ENST00000384144 107 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMARCB1Q12824 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 SNRPEP9-201ENST00000436794 238 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 MTCYBP39-201ENST00000437562 491 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMARCB1Q12824 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 ART2BP-201ENST00000453501 499 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 FABP5P15-201ENST00000453566 214 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC013267.1-201ENST00000458227 267 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AL139824.2-201ENST00000458731 1095 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 RPL23AP41-201ENST00000484754 458 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 RPS27AP10-201ENST00000496103 208 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 MRPS33P3-201ENST00000513456 322 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 RNA5SP291-201ENST00000517222 105 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 MTND4LP18-201ENST00000526864 291 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 AP003181.2-201ENST00000528941 181 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AP003122.4-201ENST00000530980 758 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 PCMTD1P2-201ENST00000565017 355 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC090616.2-202ENST00000584248 222 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 KC877982.1-201ENST00000602313 470 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AP001981.2-201ENST00000603241 418 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AL358072.1-201ENST00000604156 575 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC092140.2-201ENST00000618027 521 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 AC079248.2-201ENST00000623779 326 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 MIR7515-201ENST00000637837 67 ntBASIC2.11□□□□□ -2.07
SMARCB1Q12824 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.11□□□□□ -2.07
SMARCB1Q12824 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 UBE2L2-201ENST00000254302 429 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RNY4P24-201ENST00000362735 96 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RNU4-1-201ENST00000363925 141 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RNU6-553P-201ENST00000364047 96 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 Y_RNA.245-201ENST00000364493 95 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 MIR888-201ENST00000401186 77 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RNU2-49P-201ENST00000410666 184 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMARCB1Q12824 ZNF90P2-204ENST00000419323 1075 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 SEPT2P1-201ENST00000419651 180 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 ISCA1P1-201ENST00000426679 387 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AL133217.1-201ENST00000450980 425 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 KATNBL1P6-201ENST00000453433 915 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC108059.3-201ENST00000456388 214 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RPS3AP22-201ENST00000488297 769 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC114786.4-201ENST00000508771 728 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 RNA5SP165-201ENST00000517142 115 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AL158211.1-201ENST00000566763 763 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 MIR4524B-201ENST00000581569 115 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AL355877.2-201ENST00000603670 358 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC007363.1-201ENST00000604736 620 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC239868.4-201ENST00000608318 671 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC027807.2-201ENST00000616099 408 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms