Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSRP1Q08945 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SSRP1Q08945 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.2□□□□□ -1.74
SSRP1Q08945 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 MFSD8-236ENST00000641509 4050 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.2□□□□□ -1.74
SSRP1Q08945 Y_RNA.146-201ENST00000363549 102 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 Y_RNA.187-201ENST00000363918 113 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 RNA5SP51-201ENST00000364750 119 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SSRP1Q08945 RPL21P17-201ENST00000397467 475 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AL353729.1-201ENST00000425044 720 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.2□□□□□ -1.74
SSRP1Q08945 MRPS31P2-201ENST00000451581 518 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 RPL30P15-201ENST00000457129 321 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 RNU7-187P-201ENST00000458985 68 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 RNA5SP310-201ENST00000459084 116 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AC084357.1-201ENST00000473404 255 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AC026782.1-201ENST00000512952 449 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 Y_RNA.708-201ENST00000516950 96 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 SYF2P1-201ENST00000550658 413 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 BNIP3P22-201ENST00000593399 556 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 CYP2C61P-201ENST00000604072 290 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.2□□□□□ -1.74
SSRP1Q08945 AC018462.2-201ENST00000605375 395 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AL157817.1-201ENST00000614264 790 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AC034229.5-201ENST00000624258 185 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AC134503.1-201ENST00000633048 54 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AL669831.3-213ENST00000636676 183 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 U6.99-201ENST00000637524 83 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 AC119674.1-207ENST00000641355 633 ntBASIC4.2□□□□□ -1.74
SSRP1Q08945 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SSRP1Q08945 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SSRP1Q08945 AC073073.2-201ENST00000609827 2578 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SSRP1Q08945 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-37P-201ENST00000362692 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-11P-201ENST00000364234 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNA5SP42-201ENST00000364278 115 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-7-201ENST00000364784 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-283P-201ENST00000364788 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-8-201ENST00000365467 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-25P-201ENST00000383873 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-1-201ENST00000383898 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-48P-201ENST00000384161 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-36P-201ENST00000384172 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-4P-201ENST00000384205 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-5P-201ENST00000384238 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-3P-201ENST00000384314 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-16P-201ENST00000384385 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-15P-201ENST00000384534 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-2-201ENST00000384627 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-29P-201ENST00000384637 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-9-201ENST00000384776 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-33P-201ENST00000384793 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 SNORA75.4-201ENST00000391278 119 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AL590004.1-201ENST00000405321 300 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.19□□□□□ -1.74
SSRP1Q08945 RN7SKP53-201ENST00000411337 315 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AL035423.1-201ENST00000420331 213 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.19□□□□□ -1.74
SSRP1Q08945 AC006989.1-201ENST00000427212 131 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AL445584.1-201ENST00000431451 330 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.19□□□□□ -1.74
SSRP1Q08945 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.19□□□□□ -1.74
SSRP1Q08945 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.19□□□□□ -1.74
SSRP1Q08945 ELOCP24-201ENST00000456370 334 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 MTCYBP40-201ENST00000509390 1135 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AC093303.1-201ENST00000514549 295 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-703P-201ENST00000516946 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.19□□□□□ -1.74
SSRP1Q08945 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 AP003072.1-201ENST00000531740 145 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.19□□□□□ -1.74
SSRP1Q08945 AL080274.1-201ENST00000605565 220 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AP000654.2-201ENST00000605633 586 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 RNU6-6P-201ENST00000606623 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.19□□□□□ -1.74
SSRP1Q08945 Y_RNA.812-201ENST00000610788 101 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 Y_RNA.784-201ENST00000613803 101 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 Y_RNA.787-201ENST00000616522 101 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 PISRT1.1-201ENST00000616930 107 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 Y_RNA.780-201ENST00000617336 101 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 Y_RNA.801-201ENST00000619005 101 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 U2.21-201ENST00000637295 81 ntBASIC4.19□□□□□ -1.74
SSRP1Q08945 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SSRP1Q08945 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SSRP1Q08945 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms