Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKAP4Q07065 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.27□□□□□ -2.05
CKAP4Q07065 TPRKBP2-201ENST00000565969 475 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.27□□□□□ -2.05
CKAP4Q07065 AC026585.1-201ENST00000619582 524 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC073534.2-201ENST00000620377 381 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC124864.2-201ENST00000624736 186 ntBASIC2.27□□□□□ -2.05
CKAP4Q07065 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
CKAP4Q07065 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CKAP4Q07065 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CKAP4Q07065 RNU6-181P-201ENST00000363225 107 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 RNU6-517P-201ENST00000384362 110 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 MIR196B-201ENST00000384852 84 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 RNU6-278P-201ENST00000390945 109 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CKAP4Q07065 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.26□□□□□ -2.05
CKAP4Q07065 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.26□□□□□ -2.05
CKAP4Q07065 UBE2V1P10-201ENST00000414685 269 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AL445687.1-201ENST00000439946 251 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 MTCO3P45-201ENST00000443036 613 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 WASF1P1-201ENST00000447560 1131 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.26□□□□□ -2.05
CKAP4Q07065 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP4Q07065 snoU13.28-201ENST00000459235 104 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP4Q07065 RNU6-445P-201ENST00000516949 107 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 RNU6-1220P-201ENST00000517126 108 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP4Q07065 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.26□□□□□ -2.05
CKAP4Q07065 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP4Q07065 GLYCAM1-201ENST00000546596 285 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 GTF3AP2-201ENST00000557014 266 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP4Q07065 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP4Q07065 AC105224.1-201ENST00000587055 421 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AC025165.5-201ENST00000602802 578 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AP000860.1-201ENST00000605250 559 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 MIR98-201ENST00000606724 119 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP4Q07065 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CKAP4Q07065 AC006338.1-201ENST00000618453 749 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AC068137.3-201ENST00000639191 341 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 AC073869.6-201ENST00000640656 341 ntBASIC2.26□□□□□ -2.05
CKAP4Q07065 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.26□□□□□ -2.05
CKAP4Q07065 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.26□□□□□ -2.05
CKAP4Q07065 AC005832.2-201ENST00000538921 1430 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CKAP4Q07065 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CKAP4Q07065 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CKAP4Q07065 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 RNU6-1284P-201ENST00000363701 100 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 Y_RNA.296-201ENST00000364930 108 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 SNORA23-201ENST00000365128 182 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 RNU6-108P-201ENST00000365558 107 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 SNORA36C-201ENST00000384289 132 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 MIR221-201ENST00000385135 110 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 UBE2FP1-201ENST00000416536 447 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 Z82209.1-201ENST00000422141 2135 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 MTCO2P19-201ENST00000427513 598 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC024082.2-201ENST00000434771 238 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AL358232.1-201ENST00000448030 501 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 snoU13.22-201ENST00000459428 104 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC087588.1-201ENST00000462203 316 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 RPL30P5-201ENST00000494923 336 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CKAP4Q07065 AC002456.2-201ENST00000509356 380 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.25□□□□□ -2.05
CKAP4Q07065 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.25□□□□□ -2.05
CKAP4Q07065 AC011979.2-201ENST00000527568 352 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 FAM92A1P1-201ENST00000528023 890 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 AC124947.2-202ENST00000552735 133 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 OR11H5P-201ENST00000554039 926 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.25□□□□□ -2.05
CKAP4Q07065 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.25□□□□□ -2.05
CKAP4Q07065 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.25□□□□□ -2.05
CKAP4Q07065 MIR3935-201ENST00000583472 104 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 MIR5195-201ENST00000583555 115 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 BNIP3P33-201ENST00000598912 569 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AL391646.1-201ENST00000603860 190 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC107304.1-201ENST00000604229 296 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC004067.1-201ENST00000608733 700 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AC007684.1-201ENST00000609671 477 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.25□□□□□ -2.05
CKAP4Q07065 AC004852.3-201ENST00000614131 326 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 MIR6817-201ENST00000615588 66 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 U4.5-201ENST00000617137 123 ntBASIC2.25□□□□□ -2.05
CKAP4Q07065 DUXAP9-208ENST00000622815 614 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms