Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX4Q06945 AL138785.1-201ENST00000425821 331 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 TMSB4XP3-201ENST00000445144 114 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 AC034236.1-201ENST00000469891 373 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 RN7SL817P-201ENST00000480777 288 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX4Q06945 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 Y_RNA.683-201ENST00000516508 93 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 MIR2355-201ENST00000517199 87 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX4Q06945 CASP1P1-201ENST00000526345 212 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.49□□□□□ -1.69
SOX4Q06945 SRGNP1-201ENST00000603392 451 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 AC240442.1-201ENST00000616055 283 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 AL360181.4-201ENST00000621752 134 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SOX4Q06945 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
SOX4Q06945 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX4Q06945 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.49□□□□□ -1.69
SOX4Q06945 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
SOX4Q06945 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.49□□□□□ -1.69
SOX4Q06945 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SOX4Q06945 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX4Q06945 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX4Q06945 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SOX4Q06945 SNORD14B-201ENST00000364533 90 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 SNORD113-1-201ENST00000365321 69 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 RPL21P65-201ENST00000406094 466 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX4Q06945 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX4Q06945 AC007389.2-201ENST00000434630 306 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 AC098831.1-201ENST00000440661 216 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 PIGFP3-201ENST00000441918 722 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 U8.22-201ENST00000459141 133 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 AC022795.1-201ENST00000473808 480 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 AL049874.1-201ENST00000489560 388 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 RN7SL604P-201ENST00000492589 296 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 RNU7-175P-201ENST00000515915 61 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 Y_RNA.706-201ENST00000516933 99 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX4Q06945 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX4Q06945 AC106785.1-201ENST00000565935 262 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX4Q06945 AC008121.1-201ENST00000603244 268 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 AL161629.2-201ENST00000615347 275 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX4Q06945 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX4Q06945 NEAT1-202ENST00000501122 22743 ntBASIC4.48□□□□□ -1.69
SOX4Q06945 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX4Q06945 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SOX4Q06945 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SOX4Q06945 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 LINC01355-201ENST00000566551 5444 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 AC007785.2-201ENST00000598627 1916 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 SDAD1P2-201ENST00000441308 2028 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 Y_RNA.76-201ENST00000362931 109 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 RNU6-682P-201ENST00000363843 106 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 RNU6-937P-201ENST00000384325 106 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 LAP3P1-201ENST00000403648 294 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 MIR1179-201ENST00000408703 91 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX4Q06945 COX6CP10-201ENST00000416832 224 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX4Q06945 RPL17P36-201ENST00000420302 549 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 TOMM20P4-201ENST00000427861 435 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AC006011.1-201ENST00000442758 349 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX4Q06945 AL162151.2-201ENST00000448875 158 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 RPS29P27-201ENST00000463711 170 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 RNU6-496P-201ENST00000516145 99 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AC109479.2-201ENST00000517842 174 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AL161713.1-201ENST00000555538 145 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AC023824.2-201ENST00000566185 400 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AC120057.2-201ENST00000571520 271 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX4Q06945 RPL23AP78-201ENST00000599928 470 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AL020997.2-201ENST00000602607 184 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.47□□□□□ -1.69
SOX4Q06945 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SOX4Q06945 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX4Q06945 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX4Q06945 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SOX4Q06945 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.46□□□□□ -1.69
SOX4Q06945 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.46□□□□□ -1.69
SOX4Q06945 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SOX4Q06945 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.46□□□□□ -1.69
SOX4Q06945 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms