Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.61□□□□□ -1.99
GABPAQ06546 AC007182.2-201ENST00000489251 402 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC092436.1-201ENST00000506450 503 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 SEM1P1-201ENST00000506694 209 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.61□□□□□ -1.99
GABPAQ06546 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.61□□□□□ -1.99
GABPAQ06546 RNA5SP200-201ENST00000516360 103 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 Y_RNA.688-201ENST00000516565 95 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 Y_RNA.689-201ENST00000516589 107 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.61□□□□□ -1.99
GABPAQ06546 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.61□□□□□ -1.99
GABPAQ06546 AL158032.1-201ENST00000605401 106 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC022893.3-201ENST00000607665 437 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AL451064.1-201ENST00000607718 471 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC013562.2-201ENST00000611632 603 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AC025594.3-201ENST00000613068 790 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 MIR6715A-201ENST00000615929 79 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 AL512643.1-201ENST00000635735 524 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 Z99571.1-201ENST00000636677 394 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.61□□□□□ -1.99
GABPAQ06546 AL137003.2-201ENST00000606924 2538 ntBASIC2.61□□□□□ -1.99
GABPAQ06546 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.6□□□□□ -1.99
GABPAQ06546 RNU6-778P-201ENST00000363269 103 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.6□□□□□ -1.99
GABPAQ06546 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 RNU6-297P-201ENST00000384636 107 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AL023284.1-201ENST00000403956 276 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 RNU2-49P-201ENST00000410666 184 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 NDUFS5P4-201ENST00000412983 318 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 BX682237.1-201ENST00000415016 335 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC114491.1-201ENST00000416095 246 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.6□□□□□ -1.99
GABPAQ06546 RPL7P37-201ENST00000425095 738 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
GABPAQ06546 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.6□□□□□ -1.99
GABPAQ06546 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.6□□□□□ -1.99
GABPAQ06546 GAPDHP17-201ENST00000449858 1001 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 SNORD42A-201ENST00000459584 64 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 RPL31P41-201ENST00000477967 372 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 RPS15AP34-201ENST00000487776 387 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 RPS27AP10-201ENST00000496103 208 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AIG1P1-201ENST00000503376 148 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.6□□□□□ -1.99
GABPAQ06546 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.6□□□□□ -1.99
GABPAQ06546 SCARNA16.3-201ENST00000516595 184 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 Vault.3-201ENST00000516676 95 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 RNU6-1220P-201ENST00000517126 108 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC022616.3-201ENST00000523940 148 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 NACAP3-201ENST00000552100 481 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AL359212.1-201ENST00000556608 614 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.6□□□□□ -1.99
GABPAQ06546 MIR3167-201ENST00000579623 85 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC104984.5-201ENST00000586878 94 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC020895.1-201ENST00000595362 272 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 AC174048.1-201ENST00000603389 144 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 Z69908.1-201ENST00000622603 247 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 PISRT1-201ENST00000626175 531 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GABPAQ06546 MTND4P35-201ENST00000604257 1375 ntBASIC2.6□□□□□ -1.99
GABPAQ06546 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -1.99
GABPAQ06546 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
GABPAQ06546 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
GABPAQ06546 RNU6-658P-201ENST00000384606 106 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.59□□□□□ -1.99
GABPAQ06546 BPY2DP-201ENST00000422208 265 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AL353729.1-201ENST00000425044 720 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 RPL23AP30-201ENST00000432419 501 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 RPS24P1-201ENST00000438550 371 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.59□□□□□ -1.99
GABPAQ06546 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.59□□□□□ -1.99
GABPAQ06546 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.59□□□□□ -1.99
GABPAQ06546 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.59□□□□□ -1.99
GABPAQ06546 Y_RNA.695-201ENST00000516715 107 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AC022634.1-201ENST00000520765 532 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AC078814.3-201ENST00000553036 491 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.59□□□□□ -1.99
GABPAQ06546 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.59□□□□□ -1.99
GABPAQ06546 AC010546.1-201ENST00000569391 485 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.59□□□□□ -1.99
GABPAQ06546 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.59□□□□□ -1.99
GABPAQ06546 AL158063.1-201ENST00000615349 536 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.59□□□□□ -1.99
GABPAQ06546 MIR6873-201ENST00000622788 63 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
GABPAQ06546 U2.21-201ENST00000637295 81 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 U6.99-201ENST00000637524 83 ntBASIC2.59□□□□□ -1.99
GABPAQ06546 CR848007.1-201ENST00000442354 1699 ntBASIC2.59□□□□□ -2
GABPAQ06546 FARSBP1-201ENST00000435808 1778 ntBASIC2.59□□□□□ -2
GABPAQ06546 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.58□□□□□ -2
GABPAQ06546 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
GABPAQ06546 SNORD114-1-201ENST00000362705 72 ntBASIC2.58□□□□□ -2
GABPAQ06546 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
GABPAQ06546 Y_RNA.201-201ENST00000364052 96 ntBASIC2.58□□□□□ -2
GABPAQ06546 SNORA4.3-201ENST00000365564 137 ntBASIC2.58□□□□□ -2
GABPAQ06546 RNU6-641P-201ENST00000384006 107 ntBASIC2.58□□□□□ -2
GABPAQ06546 RNU6-190P-201ENST00000384154 102 ntBASIC2.58□□□□□ -2
GABPAQ06546 SNORA67.3-201ENST00000384366 140 ntBASIC2.58□□□□□ -2
GABPAQ06546 MIR1302-8-201ENST00000408342 128 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms