Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AL590664.1-201ENST00000448065 339 ntBASIC3.11□□□□□ -1.91
CFHR3Q02985 snoU13.28-201ENST00000459235 104 ntBASIC3.11□□□□□ -1.91
CFHR3Q02985 RPL30P14-201ENST00000482744 348 ntBASIC3.11□□□□□ -1.91
CFHR3Q02985 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.11□□□□□ -1.91
CFHR3Q02985 CPDP1-201ENST00000579660 283 ntBASIC3.11□□□□□ -1.91
CFHR3Q02985 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.11□□□□□ -1.91
CFHR3Q02985 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.11□□□□□ -1.91
CFHR3Q02985 AL773545.4-201ENST00000637262 310 ntBASIC3.11□□□□□ -1.91
CFHR3Q02985 AL513478.4-201ENST00000641636 310 ntBASIC3.11□□□□□ -1.91
CFHR3Q02985 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CFHR3Q02985 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CFHR3Q02985 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CFHR3Q02985 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CFHR3Q02985 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CFHR3Q02985 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CFHR3Q02985 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CFHR3Q02985 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CFHR3Q02985 Y_RNA.126-201ENST00000363382 111 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CFHR3Q02985 SNORA22B-201ENST00000383876 138 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 MIR518D-201ENST00000385014 87 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CFHR3Q02985 NDUFS5P4-201ENST00000412983 318 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.1□□□□□ -1.91
CFHR3Q02985 AC004552.1-201ENST00000419089 348 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 PMCHL1-202ENST00000423102 261 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC087650.1-201ENST00000431445 468 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.1□□□□□ -1.91
CFHR3Q02985 DAP3P1-201ENST00000441522 278 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 HIGD1AP2-201ENST00000446367 280 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 RPL26P9-201ENST00000457466 433 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 RPS26P3-201ENST00000470205 348 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.1□□□□□ -1.91
CFHR3Q02985 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.1□□□□□ -1.91
CFHR3Q02985 AC090543.2-201ENST00000483963 348 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC004057.1-201ENST00000485827 348 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.1□□□□□ -1.91
CFHR3Q02985 RNU6-470P-201ENST00000515954 104 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 ACA59.1-201ENST00000515966 143 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 RNU6-976P-201ENST00000516086 111 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 RNA5SP179-201ENST00000517284 121 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.1□□□□□ -1.91
CFHR3Q02985 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.1□□□□□ -1.91
CFHR3Q02985 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
CFHR3Q02985 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.1□□□□□ -1.91
CFHR3Q02985 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC120057.2-201ENST00000571520 271 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.1□□□□□ -1.91
CFHR3Q02985 AC020895.1-201ENST00000595362 272 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.1□□□□□ -1.91
CFHR3Q02985 AL606490.9-201ENST00000603331 271 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AL139395.1-201ENST00000603662 160 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AL360085.1-201ENST00000604713 532 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC016925.2-201ENST00000605108 242 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC004852.3-201ENST00000614131 326 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AC090617.7-201ENST00000623952 126 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 SCARNA4-202ENST00000625402 129 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 U4.7-201ENST00000638126 106 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.1□□□□□ -1.91
CFHR3Q02985 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
CFHR3Q02985 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CFHR3Q02985 MTND5P30-201ENST00000452896 1731 ntBASIC3.1□□□□□ -1.91
CFHR3Q02985 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CFHR3Q02985 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CFHR3Q02985 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CFHR3Q02985 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CFHR3Q02985 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.09□□□□□ -1.91
CFHR3Q02985 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CFHR3Q02985 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.09□□□□□ -1.91
CFHR3Q02985 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.09□□□□□ -1.91
CFHR3Q02985 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CFHR3Q02985 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CFHR3Q02985 Y_RNA.5-201ENST00000362334 102 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 RNU6-1115P-201ENST00000362490 106 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 RNU6-78P-201ENST00000362897 107 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 Y_RNA.463-201ENST00000384271 102 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 MIR521-1-201ENST00000384902 87 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 MIR93-201ENST00000385024 80 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AC133134.1-201ENST00000466800 359 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 SNRPGP3-201ENST00000469405 227 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 AC128713.1-201ENST00000471495 306 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 HMGN2P13-201ENST00000476476 274 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 PPIAP15-201ENST00000479662 484 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 RPS27AP10-201ENST00000496103 208 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 RPL31P61-201ENST00000496160 376 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 AC022493.2-201ENST00000506122 481 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 RNU6-307P-201ENST00000516743 106 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 AC022634.1-201ENST00000520765 532 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
CFHR3Q02985 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.09□□□□□ -1.91
CFHR3Q02985 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.09□□□□□ -1.91
CFHR3Q02985 MIR4273-201ENST00000582824 84 ntBASIC3.09□□□□□ -1.91
CFHR3Q02985 AC005899.2-201ENST00000584353 90 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms