Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-271P-201ENST00000363858 105 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 Y_RNA.245-201ENST00000364493 95 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 SNORD14B-201ENST00000364533 90 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 RNU6-1222P-201ENST00000384615 107 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 SNORA48.1-201ENST00000390879 135 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 SNORA11.2-201ENST00000408318 127 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC092634.6-201ENST00000418558 192 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 RAC1P8-201ENST00000427086 527 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC013267.1-201ENST00000458227 267 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 RNU6-775P-201ENST00000459318 96 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 RPS26P55-201ENST00000471178 356 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC092902.1-201ENST00000486999 259 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC093852.1-201ENST00000503587 266 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AP005660.1-201ENST00000522972 293 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 MTCO2P15-201ENST00000532655 656 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC084364.2-201ENST00000546924 395 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC090502.2-201ENST00000549267 280 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 NIFKP8-201ENST00000560500 874 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.85□□□□□ -2.27
HIST1H1AQ02539 NDUFA8P1-201ENST00000605525 367 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 AC097655.1-201ENST00000635075 318 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 U6.101-201ENST00000637707 76 ntBASIC0.85□□□□□ -2.27
HIST1H1AQ02539 HAUS6P2-201ENST00000433254 2404 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 OR5T3-201ENST00000303059 1023 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 SNORD115-48-201ENST00000364764 76 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 RNU6-657P-201ENST00000383904 107 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AL136133.1-201ENST00000413694 376 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 RPL23AP36-201ENST00000413895 458 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 OR6C66P-201ENST00000414917 930 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 MTND1P28-201ENST00000435623 950 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 VN1R10P-201ENST00000447106 875 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 MTND3P4-201ENST00000453537 303 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC002400.1-201ENST00000569310 726 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 VN1R80P-201ENST00000597126 338 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AL022345.1-201ENST00000607292 135 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AP001033.2-201ENST00000609701 1003 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC005858.4-201ENST00000623191 700 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AC138627.2-201ENST00000624202 601 ntBASIC0.84□□□□□ -2.27
HIST1H1AQ02539 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.84□□□□□ -2.27
HIST1H1AQ02539 AL138713.1-201ENST00000624026 2130 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 MIR378A-201ENST00000362177 66 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 RNU6-611P-201ENST00000384276 104 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 MIR513A1-201ENST00000385138 129 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 TXNP7-201ENST00000406296 293 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 MIR1262-201ENST00000408276 93 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 MTATP6P27-201ENST00000416987 621 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 MEMO1P3-201ENST00000459811 302 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC112771.1-201ENST00000463581 102 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC013828.1-201ENST00000481845 158 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 RPL21P47-201ENST00000483696 477 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 COPS8P3-201ENST00000526024 482 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC092140.2-201ENST00000618027 521 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC002550.2-201ENST00000621246 394 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC090517.3-201ENST00000625170 141 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AC092125.1-201ENST00000562568 1995 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 AL391516.1-201ENST00000554380 2449 ntBASIC0.83□□□□□ -2.28
HIST1H1AQ02539 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 RNU2-68P-201ENST00000410878 191 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 USP9YP26-201ENST00000421008 661 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 USP9YP18-201ENST00000425912 695 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 RPS6P15-201ENST00000431996 751 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 USP9YP17-201ENST00000444617 696 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AC109927.2-201ENST00000506416 303 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 RNU7-40P-201ENST00000516397 64 ntBASIC0.82□□□□□ -2.28
HIST1H1AQ02539 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
HIST1H1AQ02539 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms