Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 AP001330.4-201ENST00000604350 154 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC013468.1-201ENST00000608680 598 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC240442.1-201ENST00000616055 283 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC130454.1-201ENST00000622948 401 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 RNU6-697P-201ENST00000363348 107 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 RNU6-700P-201ENST00000391043 107 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.24□□□□□ -2.37
HSPG2P98160 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.24□□□□□ -2.37
HSPG2P98160 SNORD124-201ENST00000459577 104 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 AL133241.1-201ENST00000556832 487 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC012435.1-202ENST00000568772 240 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 MIR4299-201ENST00000577899 72 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 FAM60CP-201ENST00000591086 664 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 CLIC4P2-201ENST00000601934 717 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AL021997.1-201ENST00000605757 193 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 RMST_5.1-201ENST00000618704 126 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AL356585.4-201ENST00000623078 1229 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 MIR7157-201ENST00000635801 60 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
HSPG2P98160 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.24□□□□□ -2.37
HSPG2P98160 RNA5SP368-201ENST00000364298 116 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 MIR32-201ENST00000384965 70 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
HSPG2P98160 AL356776.1-201ENST00000406574 447 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 RNU2-21P-201ENST00000410368 188 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 RNU2-63P-201ENST00000410792 194 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC097463.2-201ENST00000421074 142 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.24□□□□□ -2.37
HSPG2P98160 RPL23AP95-201ENST00000426806 265 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.24□□□□□ -2.37
HSPG2P98160 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.24□□□□□ -2.37
HSPG2P98160 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.24□□□□□ -2.37
HSPG2P98160 HMGB1P14-201ENST00000557424 591 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC097372.4-201ENST00000625025 466 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
HSPG2P98160 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
HSPG2P98160 RNA5SP212-201ENST00000391223 107 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC009310.1-201ENST00000414414 451 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 TOMM22P2-201ENST00000430735 237 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 MTND4P6-201ENST00000438297 472 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 RNU6-420P-201ENST00000458780 107 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AC021146.2-201ENST00000504736 556 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 DUXAP1-201ENST00000556632 463 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.24□□□□□ -2.37
HSPG2P98160 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.24□□□□□ -2.37
HSPG2P98160 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.24□□□□□ -2.37
HSPG2P98160 AC005021.1-201ENST00000608730 355 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 uc_338.14-201ENST00000613162 166 ntBASIC0.24□□□□□ -2.37
HSPG2P98160 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.23□□□□□ -2.37
HSPG2P98160 RNU4-73P-201ENST00000363164 141 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 MTCO3P4-201ENST00000419236 787 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 AC006548.1-201ENST00000427470 102 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 RPL23AP3-201ENST00000453844 468 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 RNA5SP57-201ENST00000459463 123 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AC087477.1-201ENST00000465747 340 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
HSPG2P98160 RNU2-19P-201ENST00000517288 84 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.23□□□□□ -2.37
HSPG2P98160 BNIP3P16-201ENST00000589779 534 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AL138478.1-201ENST00000612252 832 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 CR381572.1-201ENST00000625098 102 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AL049737.1-201ENST00000413920 1403 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 U8.7-201ENST00000364940 136 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 RNU6-1293P-201ENST00000384077 107 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.23□□□□□ -2.37
HSPG2P98160 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.23□□□□□ -2.37
HSPG2P98160 AL589880.1-201ENST00000448271 287 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.23□□□□□ -2.37
HSPG2P98160 MIR892C-201ENST00000516410 77 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.23□□□□□ -2.37
HSPG2P98160 RNU6-156P-201ENST00000621869 107 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
HSPG2P98160 RNU6-263P-201ENST00000363811 107 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.23□□□□□ -2.37
HSPG2P98160 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.23□□□□□ -2.37
HSPG2P98160 AC092474.3-201ENST00000603022 568 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 MTCO2P22-201ENST00000603246 681 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 AL513185.3-201ENST00000433335 1300 ntBASIC0.23□□□□□ -2.37
HSPG2P98160 RNU6-452P-201ENST00000384406 107 ntBASIC0.22□□□□□ -2.37
HSPG2P98160 RNU6-1197P-201ENST00000391183 107 ntBASIC0.22□□□□□ -2.37
HSPG2P98160 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms