Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RPL21P111-201ENST00000418453 477 ntBASIC0.68□□□□□ -2.3
RPS28P62857 PIGFP2-201ENST00000421400 651 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.68□□□□□ -2.3
RPS28P62857 MTND5P25-201ENST00000430499 799 ntBASIC0.68□□□□□ -2.3
RPS28P62857 HMGB1P27-201ENST00000431429 603 ntBASIC0.68□□□□□ -2.3
RPS28P62857 MTND4LP7-201ENST00000431728 294 ntBASIC0.68□□□□□ -2.3
RPS28P62857 FTH1P12-201ENST00000432137 551 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC0.68□□□□□ -2.3
RPS28P62857 AL022238.1-201ENST00000442557 355 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.68□□□□□ -2.3
RPS28P62857 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.68□□□□□ -2.3
RPS28P62857 PRSS3P4-201ENST00000453323 162 ntBASIC0.68□□□□□ -2.3
RPS28P62857 RPS23P4-201ENST00000487908 423 ntBASIC0.68□□□□□ -2.3
RPS28P62857 MTCYBP40-201ENST00000509390 1135 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.68□□□□□ -2.3
RPS28P62857 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.68□□□□□ -2.3
RPS28P62857 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.68□□□□□ -2.3
RPS28P62857 AL353997.4-201ENST00000586196 166 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AC005786.1-201ENST00000588553 154 ntBASIC0.68□□□□□ -2.3
RPS28P62857 BX284668.6-201ENST00000606899 438 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AL021707.7-201ENST00000607991 416 ntBASIC0.68□□□□□ -2.3
RPS28P62857 MIR6820-201ENST00000611508 62 ntBASIC0.68□□□□□ -2.3
RPS28P62857 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.68□□□□□ -2.3
RPS28P62857 AL590240.4-201ENST00000616908 390 ntBASIC0.68□□□□□ -2.3
RPS28P62857 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.68□□□□□ -2.3
RPS28P62857 HPVC1-201ENST00000629899 1198 ntBASIC0.68□□□□□ -2.3
RPS28P62857 FARSBP1-201ENST00000435808 1778 ntBASIC0.68□□□□□ -2.3
RPS28P62857 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RPS28P62857 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RPS28P62857 RNU6-655P-201ENST00000362858 107 ntBASIC0.67□□□□□ -2.3
RPS28P62857 RNU1-124P-201ENST00000363861 145 ntBASIC0.67□□□□□ -2.3
RPS28P62857 PTMAP2-201ENST00000397627 327 ntBASIC0.67□□□□□ -2.3
RPS28P62857 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RPS28P62857 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
RPS28P62857 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.67□□□□□ -2.3
RPS28P62857 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC0.67□□□□□ -2.3
RPS28P62857 BRK1P2-201ENST00000442875 223 ntBASIC0.67□□□□□ -2.3
RPS28P62857 HIGD1AP2-201ENST00000446367 280 ntBASIC0.67□□□□□ -2.3
RPS28P62857 RPL7P55-201ENST00000450522 746 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.67□□□□□ -2.3
RPS28P62857 RPL9P9-202ENST00000466501 579 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AC069528.1-202ENST00000482888 637 ntBASIC0.67□□□□□ -2.3
RPS28P62857 RPS3AP22-201ENST00000488297 769 ntBASIC0.67□□□□□ -2.3
RPS28P62857 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RPS28P62857 AC104629.1-201ENST00000494226 508 ntBASIC0.67□□□□□ -2.3
RPS28P62857 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
RPS28P62857 RN7SKP258-201ENST00000517151 304 ntBASIC0.67□□□□□ -2.3
RPS28P62857 RN7SKP256-201ENST00000517201 314 ntBASIC0.67□□□□□ -2.3
RPS28P62857 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.67□□□□□ -2.3
RPS28P62857 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AC093012.1-202ENST00000549403 582 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RPS28P62857 AC044913.1-201ENST00000557200 430 ntBASIC0.67□□□□□ -2.3
RPS28P62857 ZNF971P-201ENST00000562068 1249 ntBASIC0.67□□□□□ -2.3
RPS28P62857 MIR3169-201ENST00000578032 83 ntBASIC0.67□□□□□ -2.3
RPS28P62857 MIR4310-201ENST00000582950 57 ntBASIC0.67□□□□□ -2.3
RPS28P62857 VN1R83P-201ENST00000595685 445 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AL022345.2-201ENST00000606307 135 ntBASIC0.67□□□□□ -2.3
RPS28P62857 BX248123.2-201ENST00000606318 124 ntBASIC0.67□□□□□ -2.3
RPS28P62857 MIR6817-201ENST00000615588 66 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AC018926.1-201ENST00000616335 435 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AL357080.1-201ENST00000617394 239 ntBASIC0.67□□□□□ -2.3
RPS28P62857 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.67□□□□□ -2.3
RPS28P62857 MIR6719-201ENST00000622428 87 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AC025034.2-201ENST00000623264 286 ntBASIC0.67□□□□□ -2.3
RPS28P62857 AC093648.1-201ENST00000623546 606 ntBASIC0.67□□□□□ -2.3
RPS28P62857 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC0.67□□□□□ -2.3
RPS28P62857 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.67□□□□□ -2.3
RPS28P62857 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RPS28P62857 AC099654.9-201ENST00000637055 678 ntBASIC0.67□□□□□ -2.3
RPS28P62857 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RPS28P62857 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.67□□□□□ -2.3
RPS28P62857 AC092447.10-201ENST00000620607 1652 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AL161781.1-201ENST00000354277 403 ntBASIC0.66□□□□□ -2.3
RPS28P62857 MIR449A-201ENST00000362113 91 ntBASIC0.66□□□□□ -2.3
RPS28P62857 RNA5SP374-201ENST00000362939 125 ntBASIC0.66□□□□□ -2.3
RPS28P62857 SNORA4.1-201ENST00000364263 144 ntBASIC0.66□□□□□ -2.3
RPS28P62857 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.66□□□□□ -2.3
RPS28P62857 SNORA25-201ENST00000384384 134 ntBASIC0.66□□□□□ -2.3
RPS28P62857 MIR222-201ENST00000384992 110 ntBASIC0.66□□□□□ -2.3
RPS28P62857 MIR517C-201ENST00000385103 95 ntBASIC0.66□□□□□ -2.3
RPS28P62857 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
RPS28P62857 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RPS28P62857 RNU6-1140P-201ENST00000410517 106 ntBASIC0.66□□□□□ -2.3
RPS28P62857 RNU2-52P-201ENST00000410680 190 ntBASIC0.66□□□□□ -2.3
RPS28P62857 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AL161935.2-201ENST00000414627 60 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 DPRXP1-201ENST00000426312 460 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AL445646.1-201ENST00000431784 216 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC245047.4-201ENST00000433189 144 ntBASIC0.66□□□□□ -2.3
RPS28P62857 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 RNA5SP269-201ENST00000459032 137 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC130509.1-201ENST00000464158 433 ntBASIC0.66□□□□□ -2.3
RPS28P62857 AC010631.1-201ENST00000474150 156 ntBASIC0.66□□□□□ -2.3
RPS28P62857 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RPS28P62857 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.66□□□□□ -2.3
RPS28P62857 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms