Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERVK_113P62684 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HERVK_113P62684 MTND4P1-201ENST00000457501 1466 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HERVK_113P62684 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HERVK_113P62684 Y_RNA.28-201ENST00000362554 111 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 Y_RNA.111-201ENST00000363248 100 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-512P-201ENST00000364438 103 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-335P-201ENST00000364563 113 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNA5SP167-201ENST00000365461 116 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-890P-201ENST00000384121 107 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-95P-201ENST00000384697 107 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 MIR578-201ENST00000384828 96 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-1050P-201ENST00000410388 107 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RHEBP3-201ENST00000411920 351 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AC113618.1-201ENST00000416747 285 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 TOMM22P1-201ENST00000418578 312 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.12□□□□□ -1.75
HERVK_113P62684 AC002075.2-201ENST00000425207 252 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.12□□□□□ -1.75
HERVK_113P62684 AL137792.2-201ENST00000443484 235 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.12□□□□□ -1.75
HERVK_113P62684 SNORA59A-201ENST00000459326 152 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RPL7P42-201ENST00000481005 679 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AC097473.1-201ENST00000508142 408 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 MTND3P25-201ENST00000509243 135 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-927P-201ENST00000516199 100 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNU6-143P-201ENST00000516942 93 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNA5SP471-201ENST00000516971 106 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.12□□□□□ -1.75
HERVK_113P62684 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.12□□□□□ -1.75
HERVK_113P62684 AC136443.5-201ENST00000603741 370 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 AC098657.3-201ENST00000620434 263 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 U4.6-201ENST00000621618 127 ntBASIC4.12□□□□□ -1.75
HERVK_113P62684 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HERVK_113P62684 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.11□□□□□ -1.75
HERVK_113P62684 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HERVK_113P62684 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HERVK_113P62684 SNORD3E-201ENST00000362899 217 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 SNORA38.1-201ENST00000364172 131 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HERVK_113P62684 RNU6-1040P-201ENST00000383974 107 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 Y_RNA.480-201ENST00000384364 102 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 MIR128-1-201ENST00000384921 82 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 MIR514A1-201ENST00000385133 98 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 Y_RNA.594-201ENST00000410373 140 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 AC096664.2-201ENST00000411843 406 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 ATG3P1-201ENST00000419507 911 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 AC236972.1-201ENST00000433225 199 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 HIGD1AP11-201ENST00000438361 280 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 U3.44-201ENST00000458938 192 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.11□□□□□ -1.75
HERVK_113P62684 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.11□□□□□ -1.75
HERVK_113P62684 PTP4A1P4-201ENST00000512479 322 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 APOOP4-201ENST00000513530 597 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 Y_RNA.661-201ENST00000516003 99 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 RNU6-976P-201ENST00000516086 111 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 Y_RNA.670-201ENST00000516255 105 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 RN7SKP295-201ENST00000517264 153 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.11□□□□□ -1.75
HERVK_113P62684 AP000654.2-201ENST00000605633 586 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.11□□□□□ -1.75
HERVK_113P62684 MIR8057-201ENST00000620957 69 ntBASIC4.11□□□□□ -1.75
HERVK_113P62684 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HERVK_113P62684 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.11□□□□□ -1.75
HERVK_113P62684 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HERVK_113P62684 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
HERVK_113P62684 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.1□□□□□ -1.75
HERVK_113P62684 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.1□□□□□ -1.75
HERVK_113P62684 Y_RNA.112-201ENST00000363250 102 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 Y_RNA.534-201ENST00000384599 112 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HERVK_113P62684 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.1□□□□□ -1.75
HERVK_113P62684 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.1□□□□□ -1.75
HERVK_113P62684 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.1□□□□□ -1.75
HERVK_113P62684 NDUFB1P1-201ENST00000435191 180 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.1□□□□□ -1.75
HERVK_113P62684 MTND3P2-201ENST00000438452 342 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 RPS29P31-201ENST00000446147 164 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AL360271.2-201ENST00000447710 161 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 RPL23AP31-201ENST00000456160 467 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 RPL31P60-201ENST00000478450 367 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.1□□□□□ -1.75
HERVK_113P62684 AC026782.1-201ENST00000512952 449 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 RNU6-1046P-201ENST00000516538 107 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AC069113.1-201ENST00000517763 267 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AC025946.2-201ENST00000603398 234 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AC018462.2-201ENST00000605375 395 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 RNU6-85P-201ENST00000605989 107 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AC011890.2-201ENST00000613393 294 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AL031601.2-202ENST00000622650 282 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 AC091925.1-201ENST00000623204 462 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 SDAD1P2-201ENST00000441308 2028 ntBASIC4.1□□□□□ -1.75
HERVK_113P62684 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HERVK_113P62684 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HERVK_113P62684 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HERVK_113P62684 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HERVK_113P62684 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.09□□□□□ -1.75
HERVK_113P62684 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms