Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.24□□□□□ -1.89
HDAC4P56524 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.24□□□□□ -1.89
HDAC4P56524 AL138976.2-201ENST00000563989 694 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 MIR5004-201ENST00000579078 107 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.24□□□□□ -1.89
HDAC4P56524 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 NUTF2P8-201ENST00000604593 363 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AL161798.1-201ENST00000604630 131 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AL137843.1-201ENST00000605078 385 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 RMST_3.1-201ENST00000611651 109 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AL161629.2-201ENST00000615347 275 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AL359547.2-201ENST00000615810 418 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 AC024940.5-201ENST00000622889 474 ntBASIC3.24□□□□□ -1.89
HDAC4P56524 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HDAC4P56524 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.24□□□□□ -1.89
HDAC4P56524 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HDAC4P56524 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
HDAC4P56524 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HDAC4P56524 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC4P56524 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC4P56524 Y_RNA.245-201ENST00000364493 95 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 RNU6-198P-201ENST00000384258 104 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 UBA52P6-201ENST00000399822 382 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 RPS12P24-201ENST00000412619 387 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 RPL30P16-201ENST00000419341 429 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.23□□□□□ -1.89
HDAC4P56524 AL353678.1-201ENST00000422735 741 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC4P56524 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC4P56524 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC4P56524 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.23□□□□□ -1.89
HDAC4P56524 RPL39P36-201ENST00000490784 156 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 RNA5SP503-201ENST00000517047 117 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 RANP3-201ENST00000530970 276 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 ADI1P3-201ENST00000549509 470 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC4P56524 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC4P56524 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.23□□□□□ -1.89
HDAC4P56524 AC022893.3-201ENST00000607665 437 ntBASIC3.23□□□□□ -1.89
HDAC4P56524 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC4P56524 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HDAC4P56524 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC4P56524 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC4P56524 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
HDAC4P56524 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC4P56524 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC4P56524 RNU6-552P-201ENST00000362869 119 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 RNA5SP139-201ENST00000364340 117 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 RNU6-512P-201ENST00000364438 103 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 Y_RNA.534-201ENST00000384599 112 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 SNORD67-201ENST00000390833 111 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 RNU6-550P-201ENST00000391057 101 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC4P56524 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC4P56524 CALM2P2-201ENST00000428512 440 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 HMGB1P31-201ENST00000437242 427 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 DPPA3P1-201ENST00000448050 469 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC4P56524 AC116353.2-201ENST00000505332 712 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 AC104806.1-201ENST00000508720 308 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.22□□□□□ -1.89
HDAC4P56524 AC012493.2-201ENST00000595083 291 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC4P56524 AL158032.1-201ENST00000605401 106 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 AC008945.2-201ENST00000606056 604 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC4P56524 AC099506.2-201ENST00000623074 221 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 AC024614.3-201ENST00000637860 256 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 MIR622-201ENST00000638396 96 ntBASIC3.22□□□□□ -1.89
HDAC4P56524 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HDAC4P56524 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC4P56524 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
HDAC4P56524 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.21□□□□□ -1.9
HDAC4P56524 AC073325.2-201ENST00000339545 159 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 RNU4-20P-201ENST00000365601 151 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 SNORA54-201ENST00000384281 123 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 SNORD15B-201ENST00000384714 146 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 OR9R1P-201ENST00000412200 877 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.21□□□□□ -1.9
HDAC4P56524 ATG3P1-201ENST00000419507 911 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 AC092047.1-201ENST00000424997 240 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 ZNF863P-201ENST00000426746 417 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.21□□□□□ -1.9
HDAC4P56524 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.21□□□□□ -1.9
HDAC4P56524 SEPT14P3-201ENST00000439401 183 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 AL732372.2-207ENST00000445840 183 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 SEPT14P2-201ENST00000453405 183 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 RNU7-180P-201ENST00000459240 63 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 RN7SL429P-201ENST00000479090 223 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 RN7SL489P-201ENST00000486185 223 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 RN7SL327P-201ENST00000488659 223 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 AC006445.1-201ENST00000491925 405 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 SUMO2P6-201ENST00000505273 288 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 AC009901.1-201ENST00000506703 541 ntBASIC3.21□□□□□ -1.9
HDAC4P56524 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HDAC4P56524 SEPT14P4-201ENST00000513445 186 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms