Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
COPB1P53618 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.5□□□□□ -1.85
COPB1P53618 RNU6-715P-201ENST00000365204 103 ntBASIC3.5□□□□□ -1.85
COPB1P53618 SNORA46-201ENST00000384762 135 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AL160275.3-201ENST00000423876 471 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.5□□□□□ -1.85
COPB1P53618 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.5□□□□□ -1.85
COPB1P53618 AL159987.2-201ENST00000432754 307 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AL591212.2-201ENST00000433923 257 ntBASIC3.5□□□□□ -1.85
COPB1P53618 NDUFA5P4-201ENST00000436704 385 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 RPS12P18-201ENST00000442381 270 ntBASIC3.5□□□□□ -1.85
COPB1P53618 RN7SL75P-201ENST00000461926 281 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC087588.1-201ENST00000462203 316 ntBASIC3.5□□□□□ -1.85
COPB1P53618 DYNLL1P5-201ENST00000467158 270 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC012181.1-201ENST00000479895 423 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC078918.1-201ENST00000498515 228 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC009901.1-201ENST00000506703 541 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC005921.1-201ENST00000510589 286 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.5□□□□□ -1.85
COPB1P53618 RNU2-69P-201ENST00000516061 100 ntBASIC3.5□□□□□ -1.85
COPB1P53618 RNU6-189P-201ENST00000516120 101 ntBASIC3.5□□□□□ -1.85
COPB1P53618 Y_RNA.701-201ENST00000516812 110 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.5□□□□□ -1.85
COPB1P53618 HIGD1AP1-201ENST00000550979 275 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.5□□□□□ -1.85
COPB1P53618 MIR15A-201ENST00000607334 83 ntBASIC3.5□□□□□ -1.85
COPB1P53618 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.5□□□□□ -1.85
COPB1P53618 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.5□□□□□ -1.85
COPB1P53618 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COPB1P53618 MTND4P23-201ENST00000447723 1363 ntBASIC3.5□□□□□ -1.85
COPB1P53618 AP001350.1-201ENST00000601906 1524 ntBASIC3.49□□□□□ -1.85
COPB1P53618 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COPB1P53618 AC093831.2-201ENST00000624393 3427 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RNU6-254P-201ENST00000363377 107 ntBASIC3.49□□□□□ -1.85
COPB1P53618 SNORA7.2-201ENST00000364446 145 ntBASIC3.49□□□□□ -1.85
COPB1P53618 Y_RNA.339-201ENST00000365325 102 ntBASIC3.49□□□□□ -1.85
COPB1P53618 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.49□□□□□ -1.85
COPB1P53618 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COPB1P53618 Y_RNA.460-201ENST00000384255 102 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RNU6-393P-201ENST00000384475 107 ntBASIC3.49□□□□□ -1.85
COPB1P53618 Y_RNA.534-201ENST00000384599 112 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RNVU1-14-201ENST00000384770 164 ntBASIC3.49□□□□□ -1.85
COPB1P53618 EIF4E2P1-201ENST00000393781 255 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RNA5SP111-201ENST00000411386 101 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.49□□□□□ -1.85
COPB1P53618 AC063979.1-201ENST00000415539 377 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AC016831.2-201ENST00000417179 352 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.49□□□□□ -1.85
COPB1P53618 AL158156.1-201ENST00000422509 473 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.49□□□□□ -1.85
COPB1P53618 RPL23AP31-201ENST00000456160 467 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RPL7P43-201ENST00000478876 753 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.49□□□□□ -1.85
COPB1P53618 AL049874.1-201ENST00000489560 388 ntBASIC3.49□□□□□ -1.85
COPB1P53618 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.49□□□□□ -1.85
COPB1P53618 HMGN1P13-201ENST00000505795 138 ntBASIC3.49□□□□□ -1.85
COPB1P53618 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.49□□□□□ -1.85
COPB1P53618 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.49□□□□□ -1.85
COPB1P53618 SNORA31.8-201ENST00000516327 108 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RNU6-1153P-201ENST00000516760 105 ntBASIC3.49□□□□□ -1.85
COPB1P53618 RNU6-1088P-201ENST00000516850 104 ntBASIC3.49□□□□□ -1.85
COPB1P53618 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.49□□□□□ -1.85
COPB1P53618 MIR3200-201ENST00000580767 85 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.49□□□□□ -1.85
COPB1P53618 uc_338.25-201ENST00000613756 156 ntBASIC3.49□□□□□ -1.85
COPB1P53618 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.49□□□□□ -1.85
COPB1P53618 AC090574.1-201ENST00000623186 233 ntBASIC3.49□□□□□ -1.85
COPB1P53618 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COPB1P53618 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COPB1P53618 OR4G2P-202ENST00000641004 1759 ntBASIC3.48□□□□□ -1.85
COPB1P53618 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COPB1P53618 Z83843.1-201ENST00000604070 3685 ntBASIC3.48□□□□□ -1.85
COPB1P53618 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
COPB1P53618 Y_RNA.67-201ENST00000362870 100 ntBASIC3.48□□□□□ -1.85
COPB1P53618 SNORD113-7-201ENST00000363762 77 ntBASIC3.48□□□□□ -1.85
COPB1P53618 RNU6-371P-201ENST00000364283 108 ntBASIC3.48□□□□□ -1.85
COPB1P53618 RNU6-1181P-201ENST00000384191 106 ntBASIC3.48□□□□□ -1.85
COPB1P53618 U3.19-201ENST00000390893 196 ntBASIC3.48□□□□□ -1.85
COPB1P53618 RNA5SP219-201ENST00000390940 113 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AL139039.1-201ENST00000401900 692 ntBASIC3.48□□□□□ -1.85
COPB1P53618 NDUFB4P4-201ENST00000404822 243 ntBASIC3.48□□□□□ -1.85
COPB1P53618 FAT1P1-201ENST00000406588 507 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AC080125.1-201ENST00000414888 684 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AC245054.2-201ENST00000415639 319 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.48□□□□□ -1.85
COPB1P53618 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.48□□□□□ -1.85
COPB1P53618 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.48□□□□□ -1.85
COPB1P53618 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.48□□□□□ -1.85
COPB1P53618 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.48□□□□□ -1.85
COPB1P53618 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.48□□□□□ -1.85
COPB1P53618 snoU13.4-201ENST00000458916 104 ntBASIC3.48□□□□□ -1.85
COPB1P53618 RNU7-167P-201ENST00000459160 62 ntBASIC3.48□□□□□ -1.85
COPB1P53618 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms