Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-1322P-201ENST00000364309 107 ntBASIC2.91□□□□□ -1.94
CLK1P49759 Y_RNA.245-201ENST00000364493 95 ntBASIC2.91□□□□□ -1.94
CLK1P49759 RNA5SP267-201ENST00000364893 126 ntBASIC2.91□□□□□ -1.94
CLK1P49759 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLK1P49759 RNU6-74P-201ENST00000384235 107 ntBASIC2.91□□□□□ -1.94
CLK1P49759 Y_RNA.481-201ENST00000384373 102 ntBASIC2.91□□□□□ -1.94
CLK1P49759 RNU6-456P-201ENST00000384493 107 ntBASIC2.91□□□□□ -1.94
CLK1P49759 RNU6-1158P-201ENST00000391167 107 ntBASIC2.91□□□□□ -1.94
CLK1P49759 ELOCP4-201ENST00000420090 333 ntBASIC2.91□□□□□ -1.94
CLK1P49759 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK1P49759 USP12PX-201ENST00000432383 1057 ntBASIC2.91□□□□□ -1.94
CLK1P49759 RPL7P54-201ENST00000438336 674 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AC098831.1-201ENST00000440661 216 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK1P49759 SNRPEP8-201ENST00000442866 260 ntBASIC2.91□□□□□ -1.94
CLK1P49759 MTCO3P45-201ENST00000443036 613 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK1P49759 PRSS3P4-201ENST00000453323 162 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AL139109.1-201ENST00000455491 297 ntBASIC2.91□□□□□ -1.94
CLK1P49759 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK1P49759 AC128713.1-201ENST00000471495 306 ntBASIC2.91□□□□□ -1.94
CLK1P49759 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.91□□□□□ -1.94
CLK1P49759 AC109925.1-201ENST00000478069 331 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AC079382.1-201ENST00000493346 557 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AC135721.1-201ENST00000497954 479 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
CLK1P49759 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.91□□□□□ -1.94
CLK1P49759 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK1P49759 RNU6-390P-201ENST00000516259 103 ntBASIC2.91□□□□□ -1.94
CLK1P49759 SNORA40.12-201ENST00000516329 111 ntBASIC2.91□□□□□ -1.94
CLK1P49759 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK1P49759 AL133271.1-201ENST00000538229 291 ntBASIC2.91□□□□□ -1.94
CLK1P49759 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK1P49759 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK1P49759 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.91□□□□□ -1.94
CLK1P49759 BNIP3P33-201ENST00000598912 569 ntBASIC2.91□□□□□ -1.94
CLK1P49759 KC877982.1-201ENST00000602313 470 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AL162713.1-201ENST00000604480 262 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.91□□□□□ -1.94
CLK1P49759 HMGB1P24-202ENST00000615653 685 ntBASIC2.91□□□□□ -1.94
CLK1P49759 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.91□□□□□ -1.94
CLK1P49759 AC005609.4-201ENST00000625071 447 ntBASIC2.91□□□□□ -1.94
CLK1P49759 MIR203B-201ENST00000636080 86 ntBASIC2.91□□□□□ -1.94
CLK1P49759 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLK1P49759 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.9□□□□□ -1.94
CLK1P49759 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CLK1P49759 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CLK1P49759 AC080128.1-201ENST00000474389 1917 ntBASIC2.9□□□□□ -1.95
CLK1P49759 OR1S2-201ENST00000302592 978 ntBASIC2.9□□□□□ -1.95
CLK1P49759 Y_RNA.22-201ENST00000362492 102 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RNU6-1120P-201ENST00000362988 108 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RNU6-511P-201ENST00000363496 107 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RNY3P3-201ENST00000363816 102 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RNY3P13-201ENST00000365542 102 ntBASIC2.9□□□□□ -1.95
CLK1P49759 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CLK1P49759 RNU6-39P-201ENST00000384344 107 ntBASIC2.9□□□□□ -1.95
CLK1P49759 MIR23B-201ENST00000384832 97 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RPS4XP7-201ENST00000406274 780 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.9□□□□□ -1.95
CLK1P49759 GPR143P-201ENST00000434155 205 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RPL36AP6-201ENST00000435770 321 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.9□□□□□ -1.95
CLK1P49759 MTND3P10-201ENST00000450967 341 ntBASIC2.9□□□□□ -1.95
CLK1P49759 EEF1B2P7-201ENST00000451177 676 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.9□□□□□ -1.95
CLK1P49759 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.9□□□□□ -1.95
CLK1P49759 RNU6-507P-201ENST00000516045 100 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.9□□□□□ -1.95
CLK1P49759 AL133153.1-201ENST00000557756 303 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.9□□□□□ -1.95
CLK1P49759 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.9□□□□□ -1.95
CLK1P49759 AL162413.1-201ENST00000603198 110 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AL049779.4-201ENST00000604500 156 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AC007038.2-201ENST00000608095 740 ntBASIC2.9□□□□□ -1.95
CLK1P49759 RMST_3.1-201ENST00000611651 109 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AC012314.7-201ENST00000619693 93 ntBASIC2.9□□□□□ -1.95
CLK1P49759 AC104985.2-201ENST00000620598 500 ntBASIC2.9□□□□□ -1.95
CLK1P49759 MIR3662-201ENST00000637030 95 ntBASIC2.9□□□□□ -1.95
CLK1P49759 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.9□□□□□ -1.95
CLK1P49759 ZNF680P1-201ENST00000436625 1469 ntBASIC2.9□□□□□ -1.95
CLK1P49759 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CLK1P49759 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLK1P49759 AC010889.1-201ENST00000566193 2666 ntBASIC2.89□□□□□ -1.95
CLK1P49759 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLK1P49759 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CLK1P49759 RNU6-1097P-201ENST00000363586 107 ntBASIC2.89□□□□□ -1.95
CLK1P49759 RNU6-877P-201ENST00000383868 107 ntBASIC2.89□□□□□ -1.95
CLK1P49759 MIR1-2-201ENST00000384961 85 ntBASIC2.89□□□□□ -1.95
CLK1P49759 RNU6-876P-201ENST00000391295 104 ntBASIC2.89□□□□□ -1.95
CLK1P49759 RNU2-41P-201ENST00000410991 178 ntBASIC2.89□□□□□ -1.95
CLK1P49759 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms