Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.18□□□□□ -2.22
RPL28P46779 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.18□□□□□ -2.22
RPL28P46779 AL670379.10-201ENST00000604330 253 ntBASIC1.18□□□□□ -2.22
RPL28P46779 ELOCP5-201ENST00000604924 333 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AL670379.9-201ENST00000605428 253 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AC103810.8-201ENST00000607347 118 ntBASIC1.18□□□□□ -2.22
RPL28P46779 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.18□□□□□ -2.22
RPL28P46779 AL359314.1-201ENST00000616913 261 ntBASIC1.18□□□□□ -2.22
RPL28P46779 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.18□□□□□ -2.22
RPL28P46779 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPL28P46779 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RPL28P46779 AC138393.1-203ENST00000327086 343 ntBASIC1.17□□□□□ -2.22
RPL28P46779 RNA5SP88-201ENST00000365560 109 ntBASIC1.17□□□□□ -2.22
RPL28P46779 RNU6-898P-201ENST00000365627 104 ntBASIC1.17□□□□□ -2.22
RPL28P46779 RNU6-997P-201ENST00000384725 107 ntBASIC1.17□□□□□ -2.22
RPL28P46779 RN7SKP266-201ENST00000410232 287 ntBASIC1.17□□□□□ -2.22
RPL28P46779 RNU2-20P-201ENST00000410425 191 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.17□□□□□ -2.22
RPL28P46779 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.17□□□□□ -2.22
RPL28P46779 AC104629.1-201ENST00000494226 508 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC092436.1-201ENST00000506450 503 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.17□□□□□ -2.22
RPL28P46779 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RPL28P46779 AC112198.4-201ENST00000515450 351 ntBASIC1.17□□□□□ -2.22
RPL28P46779 RNA5SP182-201ENST00000516064 82 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AP005435.4-201ENST00000529514 284 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC022880.1-201ENST00000534017 973 ntBASIC1.17□□□□□ -2.22
RPL28P46779 GNAI2P1-201ENST00000541815 315 ntBASIC1.17□□□□□ -2.22
RPL28P46779 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.17□□□□□ -2.22
RPL28P46779 MIR4713-201ENST00000582691 75 ntBASIC1.17□□□□□ -2.22
RPL28P46779 BNIP3P25-201ENST00000596023 559 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC021646.1-201ENST00000605469 484 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC107952.2-201ENST00000606048 486 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC092574.1-201ENST00000609771 420 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC245297.2-201ENST00000610119 565 ntBASIC1.17□□□□□ -2.22
RPL28P46779 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.17□□□□□ -2.22
RPL28P46779 AC090970.3-201ENST00000612566 866 ntBASIC1.17□□□□□ -2.22
RPL28P46779 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.17□□□□□ -2.22
RPL28P46779 MIR583-201ENST00000384846 75 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AL023284.1-201ENST00000403956 276 ntBASIC1.16□□□□□ -2.22
RPL28P46779 RNU2-72P-201ENST00000411175 163 ntBASIC1.16□□□□□ -2.22
RPL28P46779 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.16□□□□□ -2.22
RPL28P46779 AL592045.1-201ENST00000429867 352 ntBASIC1.16□□□□□ -2.22
RPL28P46779 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.16□□□□□ -2.22
RPL28P46779 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.16□□□□□ -2.22
RPL28P46779 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.16□□□□□ -2.22
RPL28P46779 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.16□□□□□ -2.22
RPL28P46779 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 MTND1P16-201ENST00000465177 898 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC006512.1-201ENST00000468816 291 ntBASIC1.16□□□□□ -2.22
RPL28P46779 RPL39P36-201ENST00000490784 156 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC106872.3-201ENST00000495104 446 ntBASIC1.16□□□□□ -2.22
RPL28P46779 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL28P46779 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC021146.8-201ENST00000507455 733 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC079395.1-201ENST00000510981 262 ntBASIC1.16□□□□□ -2.22
RPL28P46779 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 RNU6-572P-201ENST00000516724 80 ntBASIC1.16□□□□□ -2.22
RPL28P46779 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.16□□□□□ -2.22
RPL28P46779 RPS3AP4-201ENST00000555161 764 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC136619.2-201ENST00000563361 631 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.16□□□□□ -2.22
RPL28P46779 SEPT7P9-203ENST00000604116 343 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AL358072.1-201ENST00000604156 575 ntBASIC1.16□□□□□ -2.22
RPL28P46779 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.16□□□□□ -2.22
RPL28P46779 AC108479.2-201ENST00000617314 601 ntBASIC1.16□□□□□ -2.22
RPL28P46779 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL28P46779 AL136313.1-201ENST00000624804 202 ntBASIC1.16□□□□□ -2.22
RPL28P46779 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL28P46779 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.16□□□□□ -2.22
RPL28P46779 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPL28P46779 RNU6-1032P-201ENST00000384100 107 ntBASIC1.15□□□□□ -2.23
RPL28P46779 MIR29C-201ENST00000385231 88 ntBASIC1.15□□□□□ -2.23
RPL28P46779 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RPL28P46779 RNU2-48P-201ENST00000410694 191 ntBASIC1.15□□□□□ -2.23
RPL28P46779 OR9R1P-201ENST00000412200 877 ntBASIC1.15□□□□□ -2.23
RPL28P46779 USP9YP33-201ENST00000412220 421 ntBASIC1.15□□□□□ -2.23
RPL28P46779 EIF4EP2-201ENST00000422816 654 ntBASIC1.15□□□□□ -2.23
RPL28P46779 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.15□□□□□ -2.23
RPL28P46779 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.15□□□□□ -2.23
RPL28P46779 USP9YP35-201ENST00000435696 412 ntBASIC1.15□□□□□ -2.23
RPL28P46779 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL28P46779 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.15□□□□□ -2.23
RPL28P46779 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
RPL28P46779 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.15□□□□□ -2.23
RPL28P46779 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.15□□□□□ -2.23
RPL28P46779 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
RPL28P46779 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL28P46779 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL28P46779 CYCSP27-201ENST00000527643 293 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms