Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC112187.2-201ENST00000604345 283 ntBASIC2.41□□□□□ -2.02
ATRXP46100 AC007742.2-201ENST00000618226 398 ntBASIC2.41□□□□□ -2.02
ATRXP46100 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.41□□□□□ -2.02
ATRXP46100 AC104985.2-201ENST00000620598 500 ntBASIC2.41□□□□□ -2.02
ATRXP46100 AC040168.1-201ENST00000623594 991 ntBASIC2.41□□□□□ -2.02
ATRXP46100 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.41□□□□□ -2.02
ATRXP46100 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ATRXP46100 Y_RNA.11-201ENST00000362375 109 ntBASIC2.4□□□□□ -2.03
ATRXP46100 RNU6-1158P-201ENST00000391167 107 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.4□□□□□ -2.03
ATRXP46100 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 AC112220.1-201ENST00000434628 355 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 ARPC3P5-201ENST00000448802 534 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC104073.1-201ENST00000451988 151 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AP1S2P1-201ENST00000457344 379 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AP001086.1-201ENST00000494882 321 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 RNU2-46P-201ENST00000517038 113 ntBASIC2.4□□□□□ -2.03
ATRXP46100 RNU6-1003P-201ENST00000517099 105 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 AC022616.3-201ENST00000523940 148 ntBASIC2.4□□□□□ -2.03
ATRXP46100 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.4□□□□□ -2.03
ATRXP46100 OR5B19P-201ENST00000531766 928 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 MIR4452-201ENST00000583004 71 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC012409.4-201ENST00000612923 249 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AL596245.1-201ENST00000618994 362 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC093648.1-201ENST00000623546 606 ntBASIC2.4□□□□□ -2.03
ATRXP46100 MIR4496-201ENST00000635896 61 ntBASIC2.4□□□□□ -2.03
ATRXP46100 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
ATRXP46100 MTCO1P7-201ENST00000419523 1542 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC009902.3-201ENST00000606235 2172 ntBASIC2.4□□□□□ -2.03
ATRXP46100 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ATRXP46100 Y_RNA.251-201ENST00000364551 99 ntBASIC2.4□□□□□ -2.03
ATRXP46100 RNU1-89P-201ENST00000384592 164 ntBASIC2.4□□□□□ -2.03
ATRXP46100 RNU6-308P-201ENST00000390957 107 ntBASIC2.4□□□□□ -2.03
ATRXP46100 RNU6-876P-201ENST00000391295 104 ntBASIC2.4□□□□□ -2.03
ATRXP46100 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.4□□□□□ -2.03
ATRXP46100 AC018630.2-202ENST00000422992 927 ntBASIC2.4□□□□□ -2.03
ATRXP46100 RPL7L1P10-201ENST00000427790 463 ntBASIC2.4□□□□□ -2.03
ATRXP46100 OR51AB1P-201ENST00000429046 620 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC006539.3-201ENST00000454258 129 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 RPS29P15-201ENST00000458329 171 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AL121594.1-201ENST00000475906 575 ntBASIC2.4□□□□□ -2.03
ATRXP46100 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.4□□□□□ -2.03
ATRXP46100 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.4□□□□□ -2.03
ATRXP46100 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.4□□□□□ -2.03
ATRXP46100 AC091135.1-201ENST00000585943 307 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AL078603.1-201ENST00000603824 313 ntBASIC2.4□□□□□ -2.03
ATRXP46100 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.4□□□□□ -2.03
ATRXP46100 MIR6515-201ENST00000619843 57 ntBASIC2.4□□□□□ -2.03
ATRXP46100 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
ATRXP46100 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.39□□□□□ -2.03
ATRXP46100 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
ATRXP46100 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
ATRXP46100 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ATRXP46100 ZNF680P1-201ENST00000436625 1469 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC121333.1-201ENST00000567488 2709 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC011155.1-201ENST00000316512 456 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RN7SKP44-201ENST00000363602 316 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RNU6-39P-201ENST00000384344 107 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RNU6-456P-201ENST00000384493 107 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC007064.1-201ENST00000412238 351 ntBASIC2.39□□□□□ -2.03
ATRXP46100 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ATRXP46100 AC245291.1-201ENST00000419501 328 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RPS15AP40-201ENST00000419621 391 ntBASIC2.39□□□□□ -2.03
ATRXP46100 MTCYBP45-201ENST00000435243 565 ntBASIC2.39□□□□□ -2.03
ATRXP46100 MTND1P17-201ENST00000448961 204 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC003071.1-201ENST00000451219 789 ntBASIC2.39□□□□□ -2.03
ATRXP46100 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.39□□□□□ -2.03
ATRXP46100 RPS29P25-201ENST00000481709 171 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC004062.1-201ENST00000509926 645 ntBASIC2.39□□□□□ -2.03
ATRXP46100 TXNP6-201ENST00000510190 310 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RNA5SP217-201ENST00000515959 91 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RN7SKP258-201ENST00000517151 304 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.39□□□□□ -2.03
ATRXP46100 AL133153.1-201ENST00000557756 303 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AC012119.1-201ENST00000603184 222 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AL009028.1-201ENST00000604895 802 ntBASIC2.39□□□□□ -2.03
ATRXP46100 DUXAP9-208ENST00000622815 614 ntBASIC2.39□□□□□ -2.03
ATRXP46100 GABPAP-201ENST00000419271 1356 ntBASIC2.39□□□□□ -2.03
ATRXP46100 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
ATRXP46100 RNU6-288P-201ENST00000363690 104 ntBASIC2.39□□□□□ -2.03
ATRXP46100 SNORA62.1-201ENST00000364287 154 ntBASIC2.39□□□□□ -2.03
ATRXP46100 Y_RNA.315-201ENST00000365117 102 ntBASIC2.39□□□□□ -2.03
ATRXP46100 Y_RNA.356-201ENST00000365475 113 ntBASIC2.39□□□□□ -2.03
ATRXP46100 AL359634.1-202ENST00000404721 284 ntBASIC2.39□□□□□ -2.03
ATRXP46100 RN7SKP285-201ENST00000410137 318 ntBASIC2.39□□□□□ -2.03
ATRXP46100 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms