Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 Y_RNA.72-201ENST00000362894 103 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 Y_RNA.279-201ENST00000364763 95 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RNU4-20P-201ENST00000365601 151 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AL359837.1-201ENST00000381357 287 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 Y_RNA.390-201ENST00000383932 102 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RNY3P14-201ENST00000384309 102 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MT-TL1-201ENST00000386347 75 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MIR767-201ENST00000390228 109 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AL606923.1-201ENST00000406616 190 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RPL5P18-201ENST00000406671 891 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 CYCSP19-201ENST00000411715 316 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AL353621.1-201ENST00000418219 243 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RPL30P16-201ENST00000419341 429 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.64□□□□□ -1.99
NKX2-1P43699 AL445584.1-201ENST00000431451 330 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC073063.1-201ENST00000434352 607 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RPS15AP5-201ENST00000436276 388 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 HMGN2P10-201ENST00000448085 265 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RPS15AP27-201ENST00000449183 343 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MTND3P10-201ENST00000450967 341 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 SCARNA18-201ENST00000459004 134 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NKX2-1P43699 RPS26P21-201ENST00000475397 348 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 RPS27P26-201ENST00000494583 239 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 Y_RNA.654-201ENST00000497848 106 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC008716.1-201ENST00000511084 513 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC025755.1-201ENST00000521306 278 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.64□□□□□ -1.99
NKX2-1P43699 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.64□□□□□ -1.99
NKX2-1P43699 CENPUP1-201ENST00000526649 1202 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC005476.1-201ENST00000554427 397 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC106785.1-201ENST00000565935 262 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MIR4782-201ENST00000577987 79 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MIR5692A1-201ENST00000580523 69 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC010525.2-201ENST00000590920 195 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AL645944.1-201ENST00000603857 493 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.64□□□□□ -1.99
NKX2-1P43699 RMST_4.1-201ENST00000616886 107 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 MIR3199-2-201ENST00000636243 86 ntBASIC2.64□□□□□ -1.99
NKX2-1P43699 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NKX2-1P43699 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
NKX2-1P43699 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
NKX2-1P43699 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU1-70P-201ENST00000362618 164 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-1P43699 Y_RNA.480-201ENST00000384364 102 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU6-393P-201ENST00000384475 107 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU6-750P-201ENST00000390946 107 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNA5SP229-201ENST00000410809 99 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU6-607P-201ENST00000411283 108 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNA5SP111-201ENST00000411386 101 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AC023141.4-201ENST00000412031 328 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.63□□□□□ -1.99
NKX2-1P43699 MTND4LP11-201ENST00000422184 280 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AL358075.3-201ENST00000426289 226 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AL078601.1-201ENST00000444542 271 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU7-167P-201ENST00000459160 62 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU6-1208P-201ENST00000459588 107 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RPS29P12-201ENST00000460178 152 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RPS29P20-201ENST00000489592 171 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AP002812.1-201ENST00000495378 474 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.63□□□□□ -1.99
NKX2-1P43699 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU2-69P-201ENST00000516061 100 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 RNU6-1183P-201ENST00000517054 60 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.63□□□□□ -1.99
NKX2-1P43699 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.63□□□□□ -1.99
NKX2-1P43699 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-1P43699 OR5B10P-201ENST00000532869 642 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.63□□□□□ -1.99
NKX2-1P43699 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.63□□□□□ -1.99
NKX2-1P43699 AC090115.3-201ENST00000553218 849 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 PSMA3P-201ENST00000555485 635 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AC021739.1-201ENST00000559631 174 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 LINC00933-203ENST00000559812 219 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.63□□□□□ -1.99
NKX2-1P43699 LRRC37A5P-203ENST00000580181 585 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
NKX2-1P43699 AL670379.4-201ENST00000605279 254 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AC022418.1-201ENST00000624118 445 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 AL008636.1-201ENST00000625038 1018 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.63□□□□□ -1.99
NKX2-1P43699 U6.99-201ENST00000637524 83 ntBASIC2.63□□□□□ -1.99
NKX2-1P43699 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NKX2-1P43699 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NKX2-1P43699 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.63□□□□□ -1.99
NKX2-1P43699 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.62□□□□□ -1.99
NKX2-1P43699 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.62□□□□□ -1.99
NKX2-1P43699 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NKX2-1P43699 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 Y_RNA.212-201ENST00000364177 102 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 DYNLT3P1-201ENST00000378574 347 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NKX2-1P43699 RNU6-116P-201ENST00000384042 109 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 RNU6-658P-201ENST00000384606 106 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 SNORA16.2-201ENST00000390991 127 ntBASIC2.62□□□□□ -1.99
NKX2-1P43699 MIR1289-1-201ENST00000408836 144 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 157.1 ms