Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.97□□□□□ -2.09
TNFSF9P41273 MTND4P25-201ENST00000441039 533 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 CR769776.1-201ENST00000441254 787 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 MTND3P1-201ENST00000441336 220 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 AC124916.1-201ENST00000444020 547 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC092001.1-201ENST00000453012 261 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.97□□□□□ -2.09
TNFSF9P41273 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.97□□□□□ -2.09
TNFSF9P41273 RNU7-193P-201ENST00000516723 65 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AL138976.2-201ENST00000563989 694 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.97□□□□□ -2.09
TNFSF9P41273 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TNFSF9P41273 AC072039.2-201ENST00000608883 439 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 AC022960.3-201ENST00000619794 441 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.97□□□□□ -2.09
TNFSF9P41273 AL109809.4-201ENST00000603520 2185 ntBASIC1.97□□□□□ -2.09
TNFSF9P41273 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.97□□□□□ -2.09
TNFSF9P41273 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TNFSF9P41273 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
TNFSF9P41273 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFSF9P41273 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 RNU6-701P-201ENST00000384059 107 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TNFSF9P41273 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TNFSF9P41273 MIR1294-201ENST00000408503 142 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF9P41273 MTND1P23-201ENST00000416931 372 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF9P41273 AC093106.2-201ENST00000428212 385 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFSF9P41273 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFSF9P41273 AC004383.1-201ENST00000438135 289 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 USP9YP15-201ENST00000442391 422 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF9P41273 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF9P41273 AL441985.1-201ENST00000457727 251 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFSF9P41273 RPL22P13-201ENST00000493291 347 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFSF9P41273 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
TNFSF9P41273 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TNFSF9P41273 SMURF2P1-201ENST00000514992 481 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 RNA5SP82-201ENST00000516707 92 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFSF9P41273 DEFB108A-201ENST00000530110 222 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AC013828.2-201ENST00000532487 235 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFSF9P41273 MIR4293-201ENST00000584305 78 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
TNFSF9P41273 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFSF9P41273 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFSF9P41273 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
TNFSF9P41273 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFSF9P41273 RNU6-157P-201ENST00000383957 107 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 SNORA51.11-201ENST00000384442 131 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 MIR1305-201ENST00000408300 86 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 RNA5SP270-201ENST00000411361 118 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 USP9YP6-201ENST00000413550 854 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 MTND1P32-201ENST00000433043 938 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 RPL23AP35-201ENST00000451906 501 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AC026801.1-201ENST00000497178 464 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AC022662.1-201ENST00000580252 331 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 MIR544B-201ENST00000582372 78 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AC013244.3-201ENST00000605614 388 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AL607023.1-201ENST00000620045 248 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
TNFSF9P41273 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFSF9P41273 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms