Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC010376.1-201ENST00000522101 334 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.62□□□□□ -2.15
COL18A1P39060 AC005730.3-201ENST00000583067 366 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC011712.1-201ENST00000588959 234 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AP000403.1-201ENST00000603349 851 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AL391646.1-201ENST00000603860 190 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC016727.2-201ENST00000603988 621 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC024060.1-201ENST00000607052 494 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 SDR42E1P2-201ENST00000614861 481 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC104985.3-201ENST00000623479 597 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
COL18A1P39060 AP000648.3-201ENST00000623539 4507 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC068700.1-201ENST00000565862 3754 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL18A1P39060 Y_RNA.408-201ENST00000383987 102 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 RNU2-33P-201ENST00000410344 192 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 RNU4-72P-201ENST00000410754 173 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC023141.4-201ENST00000412031 328 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 BX119904.4-201ENST00000424402 301 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 MTND1P31-201ENST00000449206 961 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.62□□□□□ -2.15
COL18A1P39060 AC112198.4-201ENST00000515450 351 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.62□□□□□ -2.15
COL18A1P39060 AC009127.3-201ENST00000570531 403 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 MTND3P13-201ENST00000574391 343 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 AC007349.4-201ENST00000608114 532 ntBASIC1.62□□□□□ -2.15
COL18A1P39060 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL18A1P39060 AL161722.3-201ENST00000605789 2983 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 RNU6-920P-201ENST00000410926 92 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 AC096649.2-201ENST00000416186 393 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.61□□□□□ -2.15
COL18A1P39060 AL451054.2-201ENST00000420896 202 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 GTF2IP3-201ENST00000433887 494 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.61□□□□□ -2.15
COL18A1P39060 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.61□□□□□ -2.15
COL18A1P39060 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.61□□□□□ -2.15
COL18A1P39060 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.61□□□□□ -2.15
COL18A1P39060 AC024589.1-201ENST00000512207 263 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 MIR5571-201ENST00000577998 113 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.61□□□□□ -2.15
COL18A1P39060 AC005332.10-201ENST00000612725 619 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.61□□□□□ -2.15
COL18A1P39060 AL158163.2-201ENST00000619110 700 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 AC092447.10-201ENST00000620607 1652 ntBASIC1.61□□□□□ -2.15
COL18A1P39060 SNORA40.2-201ENST00000390847 128 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 NDUFS5P4-201ENST00000412983 318 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 BPY2DP-201ENST00000422208 265 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 HMGB1P9-201ENST00000429856 646 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 MED14P1-201ENST00000430517 648 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.6□□□□□ -2.15
COL18A1P39060 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.6□□□□□ -2.15
COL18A1P39060 USP12PX-201ENST00000432383 1057 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 MICF-203ENST00000432679 129 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 RPS15AP5-201ENST00000436276 388 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 SNRPEP7-201ENST00000438350 220 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 IPO7P1-201ENST00000442031 636 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 MTND1P18-201ENST00000448191 573 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.6□□□□□ -2.15
COL18A1P39060 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.6□□□□□ -2.15
COL18A1P39060 AC105252.1-201ENST00000503089 286 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.6□□□□□ -2.15
COL18A1P39060 AC110760.3-202ENST00000515177 371 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 DUXAP5-201ENST00000529668 529 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.6□□□□□ -2.15
COL18A1P39060 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.6□□□□□ -2.15
COL18A1P39060 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.6□□□□□ -2.15
COL18A1P39060 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.6□□□□□ -2.15
COL18A1P39060 AC068057.2-201ENST00000624047 895 ntBASIC1.6□□□□□ -2.15
COL18A1P39060 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL18A1P39060 Y_RNA.311-201ENST00000365068 96 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 AC074117.2-201ENST00000417130 397 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.59□□□□□ -2.15
COL18A1P39060 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.59□□□□□ -2.15
COL18A1P39060 AC007327.1-201ENST00000447461 264 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 PAXBP1P1-201ENST00000449315 447 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 RNA5SP290-201ENST00000517133 127 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 AC005951.2-201ENST00000576282 495 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 MIR4658-201ENST00000584344 65 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 AL606834.3-201ENST00000602615 496 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.59□□□□□ -2.15
COL18A1P39060 HMGB1P24-202ENST00000615653 685 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 AC010889.1-201ENST00000566193 2666 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.59□□□□□ -2.15
COL18A1P39060 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 Y_RNA.245-201ENST00000364493 95 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AL355497.1-201ENST00000406262 551 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 HMGN1P14-201ENST00000412459 517 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.59□□□□□ -2.16
COL18A1P39060 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.59□□□□□ -2.16
COL18A1P39060 SNRPEP9-201ENST00000436794 238 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AC107626.1-201ENST00000471084 183 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AC090096.1-201ENST00000489168 390 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AC021451.1-201ENST00000523498 1129 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AF038458.1-201ENST00000588406 262 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 RPL21P136-201ENST00000605378 396 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.59□□□□□ -2.16
COL18A1P39060 TUG1_2.1-201ENST00000614234 87 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 AC109809.1-201ENST00000619665 545 ntBASIC1.59□□□□□ -2.16
COL18A1P39060 LINC02211-204ENST00000642024 1070 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms