Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS4P35443 SNORD116-11-201ENST00000383882 92 ntBASIC3.31□□□□□ -1.88
THBS4P35443 RNU6-128P-201ENST00000383976 107 ntBASIC3.31□□□□□ -1.88
THBS4P35443 RNU6-1179P-201ENST00000384667 107 ntBASIC3.31□□□□□ -1.88
THBS4P35443 SNORA57.3-201ENST00000411095 141 ntBASIC3.31□□□□□ -1.88
THBS4P35443 RNU6-607P-201ENST00000411283 108 ntBASIC3.31□□□□□ -1.88
THBS4P35443 RNU6-1304P-201ENST00000411374 106 ntBASIC3.31□□□□□ -1.88
THBS4P35443 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS4P35443 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS4P35443 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.31□□□□□ -1.88
THBS4P35443 Y_RNA.631-201ENST00000459607 101 ntBASIC3.31□□□□□ -1.88
THBS4P35443 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS4P35443 RN7SKP83-201ENST00000516512 178 ntBASIC3.31□□□□□ -1.88
THBS4P35443 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS4P35443 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.31□□□□□ -1.88
THBS4P35443 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.31□□□□□ -1.88
THBS4P35443 RNU6-323P-201ENST00000521915 107 ntBASIC3.31□□□□□ -1.88
THBS4P35443 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.31□□□□□ -1.88
THBS4P35443 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS4P35443 AC020661.2-201ENST00000560114 134 ntBASIC3.31□□□□□ -1.88
THBS4P35443 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS4P35443 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.31□□□□□ -1.88
THBS4P35443 MIR3171-201ENST00000584270 74 ntBASIC3.31□□□□□ -1.88
THBS4P35443 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS4P35443 AL162730.1-201ENST00000605734 292 ntBASIC3.31□□□□□ -1.88
THBS4P35443 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.31□□□□□ -1.88
THBS4P35443 RMST_4.1-201ENST00000616886 107 ntBASIC3.31□□□□□ -1.88
THBS4P35443 AC010378.1-201ENST00000619270 362 ntBASIC3.31□□□□□ -1.88
THBS4P35443 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.31□□□□□ -1.88
THBS4P35443 U2.21-201ENST00000637295 81 ntBASIC3.31□□□□□ -1.88
THBS4P35443 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
THBS4P35443 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
THBS4P35443 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
THBS4P35443 AC005183.1-201ENST00000603687 1979 ntBASIC3.31□□□□□ -1.88
THBS4P35443 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.3□□□□□ -1.88
THBS4P35443 SNORD3E-201ENST00000362899 217 ntBASIC3.3□□□□□ -1.88
THBS4P35443 RNU6-1303P-201ENST00000364841 107 ntBASIC3.3□□□□□ -1.88
THBS4P35443 SNORA62.3-201ENST00000365110 153 ntBASIC3.3□□□□□ -1.88
THBS4P35443 Y_RNA.480-201ENST00000384364 102 ntBASIC3.3□□□□□ -1.88
THBS4P35443 Y_RNA.482-201ENST00000384377 111 ntBASIC3.3□□□□□ -1.88
THBS4P35443 SNORA40C-201ENST00000391285 128 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MIR888-201ENST00000401186 77 ntBASIC3.3□□□□□ -1.88
THBS4P35443 RNU2-3P-201ENST00000410144 191 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MTND2P23-201ENST00000422990 651 ntBASIC3.3□□□□□ -1.88
THBS4P35443 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.3□□□□□ -1.88
THBS4P35443 AC098614.2-201ENST00000426040 255 ntBASIC3.3□□□□□ -1.88
THBS4P35443 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.3□□□□□ -1.88
THBS4P35443 FABP5P14-201ENST00000437273 393 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MTND1P17-201ENST00000448961 204 ntBASIC3.3□□□□□ -1.88
THBS4P35443 Y_RNA.639-201ENST00000458981 102 ntBASIC3.3□□□□□ -1.88
THBS4P35443 RPL21P13-201ENST00000488305 481 ntBASIC3.3□□□□□ -1.88
THBS4P35443 HMGB1P30-201ENST00000492455 606 ntBASIC3.3□□□□□ -1.88
THBS4P35443 RNU6-327P-201ENST00000516270 127 ntBASIC3.3□□□□□ -1.88
THBS4P35443 RNA5SP164-201ENST00000516533 110 ntBASIC3.3□□□□□ -1.88
THBS4P35443 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
THBS4P35443 RNU6-703P-201ENST00000516946 107 ntBASIC3.3□□□□□ -1.88
THBS4P35443 SNORA31.19-201ENST00000517079 126 ntBASIC3.3□□□□□ -1.88
THBS4P35443 TRMT10BP1-201ENST00000519377 943 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.3□□□□□ -1.88
THBS4P35443 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 APOOP3-201ENST00000536787 586 ntBASIC3.3□□□□□ -1.88
THBS4P35443 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.3□□□□□ -1.88
THBS4P35443 AL163153.1-201ENST00000554223 283 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.3□□□□□ -1.88
THBS4P35443 AC087499.8-201ENST00000578406 226 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MIR5690-201ENST00000583739 73 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MIR5692C1-201ENST00000585309 91 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AL355598.1-201ENST00000604169 202 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AC124303.1-201ENST00000605703 360 ntBASIC3.3□□□□□ -1.88
THBS4P35443 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 AL138726.1-201ENST00000614873 333 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AL138880.2-201ENST00000616214 239 ntBASIC3.3□□□□□ -1.88
THBS4P35443 ATP5A1P2-202ENST00000616464 443 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AL355365.1-201ENST00000616480 294 ntBASIC3.3□□□□□ -1.88
THBS4P35443 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.3□□□□□ -1.88
THBS4P35443 AL031601.2-202ENST00000622650 282 ntBASIC3.3□□□□□ -1.88
THBS4P35443 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
THBS4P35443 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
THBS4P35443 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
THBS4P35443 ZNF519P1-201ENST00000449011 1626 ntBASIC3.3□□□□□ -1.88
THBS4P35443 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
THBS4P35443 MTCO1P12-201ENST00000414273 1543 ntBASIC3.29□□□□□ -1.88
THBS4P35443 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.29□□□□□ -1.88
THBS4P35443 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
THBS4P35443 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
THBS4P35443 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
THBS4P35443 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
THBS4P35443 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.29□□□□□ -1.88
THBS4P35443 Y_RNA.132-201ENST00000363421 102 ntBASIC3.29□□□□□ -1.88
THBS4P35443 RNU6-593P-201ENST00000364716 112 ntBASIC3.29□□□□□ -1.88
THBS4P35443 SNORD42.2-201ENST00000365570 69 ntBASIC3.29□□□□□ -1.88
THBS4P35443 MIR559-201ENST00000385188 96 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms