Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 FRG1KP-201ENST00000623592 341 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 MIR3199-2-201ENST00000636243 86 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.15□□□□□ -2.07
SHMT2P34897 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.15□□□□□ -2.07
SHMT2P34897 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
SHMT2P34897 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.15□□□□□ -2.07
SHMT2P34897 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHMT2P34897 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SHMT2P34897 RNU6-960P-201ENST00000364056 120 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.14□□□□□ -2.07
SHMT2P34897 RNU6-946P-201ENST00000383878 107 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 RNU5A-2P-201ENST00000384337 116 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AL365203.2-201ENST00000423444 196 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC007283.2-201ENST00000424739 197 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AL591212.2-201ENST00000433923 257 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 PGBD4P3-201ENST00000440731 581 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 TAF9P1-201ENST00000445421 515 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 USP9YP12-201ENST00000450481 570 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 TAF9P2-201ENST00000454958 515 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.14□□□□□ -2.07
SHMT2P34897 ANXA2P1-201ENST00000505539 926 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC010587.1-201ENST00000505809 469 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 NDUFB4P2-201ENST00000509515 391 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.14□□□□□ -2.07
SHMT2P34897 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.14□□□□□ -2.07
SHMT2P34897 SNORA31.18-201ENST00000517043 134 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 RNU6-1183P-201ENST00000517054 60 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.14□□□□□ -2.07
SHMT2P34897 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.14□□□□□ -2.07
SHMT2P34897 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.14□□□□□ -2.07
SHMT2P34897 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.14□□□□□ -2.07
SHMT2P34897 AC005261.5-201ENST00000596280 355 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC012065.4-201ENST00000602445 679 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 BNIP3P9-201ENST00000603714 553 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AP002360.4-201ENST00000606980 481 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 RNU6-87P-201ENST00000607561 108 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC022893.3-201ENST00000607665 437 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AL451064.1-201ENST00000607718 471 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC063944.3-201ENST00000609969 533 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC011939.3-201ENST00000613686 466 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC122133.1-201ENST00000613964 233 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC130324.3-201ENST00000614165 542 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 AC009878.1-201ENST00000621819 340 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 CU459211.1-201ENST00000635667 749 ntBASIC2.14□□□□□ -2.07
SHMT2P34897 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHMT2P34897 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHMT2P34897 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 ADAM3A-203ENST00000461344 2157 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SHMT2P34897 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 MTND4P35-201ENST00000604257 1375 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 RNU5E-1-201ENST00000362477 120 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.13□□□□□ -2.07
SHMT2P34897 Z98749.2-208ENST00000381646 500 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 RNU6-190P-201ENST00000384154 102 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 SNORA11.2-201ENST00000408318 127 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 RN7SKP223-201ENST00000410582 62 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 HMGB3P2-201ENST00000411913 584 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 OR51A5P-201ENST00000415429 942 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.13□□□□□ -2.07
SHMT2P34897 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.13□□□□□ -2.07
SHMT2P34897 DPH3P2-201ENST00000422618 250 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.13□□□□□ -2.07
SHMT2P34897 AL139415.2-201ENST00000431968 163 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 AL445687.1-201ENST00000439946 251 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHMT2P34897 AL139109.1-201ENST00000455491 297 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 MTCO2P29-201ENST00000465212 189 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC007182.2-201ENST00000489251 402 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.13□□□□□ -2.07
SHMT2P34897 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.13□□□□□ -2.07
SHMT2P34897 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
SHMT2P34897 AC022447.1-201ENST00000515358 464 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 FABP5P5-201ENST00000515537 406 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 RNU7-51P-201ENST00000516560 62 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 RNU6-677P-201ENST00000516914 101 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 SNORD19.2-201ENST00000516978 73 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
SHMT2P34897 AC022878.1-201ENST00000530684 149 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC007151.1-201ENST00000572774 483 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 ROCK1P1-201ENST00000573767 549 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.13□□□□□ -2.07
SHMT2P34897 MIR3117-201ENST00000584034 78 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 MIR548AB-201ENST00000584917 84 ntBASIC2.13□□□□□ -2.07
SHMT2P34897 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.13□□□□□ -2.07
SHMT2P34897 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.13□□□□□ -2.07
SHMT2P34897 AL512643.1-201ENST00000635735 524 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms