Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MIR26A1-201ENST00000362205 77 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 RNU6-859P-201ENST00000362728 107 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 RNU4-12P-201ENST00000365233 139 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 RNU6-1027P-201ENST00000383998 107 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 MTCO3P40-201ENST00000392516 676 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 CISD1P1-201ENST00000393907 327 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 BTF3P7-201ENST00000407097 488 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA13P31271 AC080125.1-201ENST00000414888 684 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA13P31271 AL109913.1-201ENST00000421173 514 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA13P31271 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA13P31271 ISCA1P1-201ENST00000426679 387 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA13P31271 AC002486.1-201ENST00000435098 391 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 RPL36AP6-201ENST00000435770 321 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 FABP5P15-201ENST00000453566 214 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA13P31271 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA13P31271 RPS29P20-201ENST00000489592 171 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HOXA13P31271 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA13P31271 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA13P31271 RANP3-201ENST00000530970 276 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA13P31271 DNAJC8P1-201ENST00000554535 372 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC234778.2-201ENST00000566241 354 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA13P31271 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXA13P31271 MIR15A-201ENST00000607334 83 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC012409.4-201ENST00000612923 249 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC007014.2-201ENST00000615581 479 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 AC009161.2-201ENST00000624626 138 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 MTND4P35-201ENST00000604257 1375 ntBASIC3.08□□□□□ -1.92
HOXA13P31271 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA13P31271 AL161431.1-201ENST00000618966 4205 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HOXA13P31271 Y_RNA.390-201ENST00000383932 102 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 MIR888-201ENST00000401186 77 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 RPS4XP8-201ENST00000402039 771 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA13P31271 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA13P31271 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AC132479.1-201ENST00000449160 144 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 MTCO3P38-201ENST00000468910 766 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AP002884.2-201ENST00000471647 395 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AC092989.1-201ENST00000481235 277 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AC139453.3-201ENST00000493276 369 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 HMGB1P29-201ENST00000505659 499 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 RBBP4P6-201ENST00000508098 202 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AC009646.1-201ENST00000510455 318 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA13P31271 AL391261.3-201ENST00000557194 520 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA13P31271 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA13P31271 HMGN2P15-201ENST00000585707 270 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA13P31271 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA13P31271 AC093648.1-201ENST00000623546 606 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 U6.99-201ENST00000637524 83 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
HOXA13P31271 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
HOXA13P31271 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
HOXA13P31271 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA13P31271 MAPK10-322ENST00000641485 4530 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA13P31271 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA13P31271 Y_RNA.1-201ENST00000352915 104 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 RNU6-799P-201ENST00000363567 107 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 RNU6-61P-201ENST00000365528 109 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 SNORA4.3-201ENST00000365564 137 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXA13P31271 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA13P31271 RNU6-658P-201ENST00000384606 106 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 MTND5P7-201ENST00000413558 1798 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA13P31271 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA13P31271 USP9YP18-201ENST00000425912 695 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA13P31271 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.06□□□□□ -1.92
HOXA13P31271 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA13P31271 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA13P31271 AC027673.1-201ENST00000456245 405 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA13P31271 AC091179.1-201ENST00000461606 579 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 MRPS17P3-201ENST00000465453 385 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 AC092185.1-201ENST00000491371 97 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 AC069439.1-201ENST00000494739 167 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 FAM92A1P2-202ENST00000504766 877 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 AC104806.1-201ENST00000508720 308 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA13P31271 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA13P31271 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA13P31271 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA13P31271 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
HOXA13P31271 AC024619.4-201ENST00000580924 316 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms