Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 Z83846.1-201ENST00000446798 265 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN4P29074 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN4P29074 RAP1BP2-201ENST00000478270 544 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.49□□□□□ -2.01
PTPN4P29074 MTND1P3-201ENST00000484956 952 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN4P29074 AC010587.1-201ENST00000505809 469 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.49□□□□□ -2.01
PTPN4P29074 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN4P29074 Y_RNA.672-201ENST00000516289 104 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 RNU6-703P-201ENST00000516946 107 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 RNA5SP337-201ENST00000517007 109 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN4P29074 CKS1BP7-201ENST00000522230 235 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPN4P29074 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.49□□□□□ -2.01
PTPN4P29074 PRELID2P1-201ENST00000552837 301 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AC091544.4-201ENST00000555268 342 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 MIR3682-201ENST00000581338 84 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AL451064.1-201ENST00000607718 471 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AL589994.2-201ENST00000621124 579 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.49□□□□□ -2.01
PTPN4P29074 MTND5P42-201ENST00000637720 498 ntBASIC2.49□□□□□ -2.01
PTPN4P29074 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PTPN4P29074 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTPN4P29074 Y_RNA.77-201ENST00000362962 107 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 RNU6-297P-201ENST00000384636 107 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 SNORA40.3-201ENST00000390964 122 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AL162578.1-201ENST00000406202 378 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC007064.1-201ENST00000412238 351 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 RPS12P24-201ENST00000412619 387 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AF274854.1-201ENST00000413236 615 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC080125.1-201ENST00000414888 684 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.48□□□□□ -2.01
PTPN4P29074 MYL8P-204ENST00000431574 518 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AL591704.1-201ENST00000432574 275 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.48□□□□□ -2.01
PTPN4P29074 SNORD42A-201ENST00000459584 64 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 TRBV12-1-201ENST00000479785 344 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC023141.11-201ENST00000508864 202 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC091965.2-201ENST00000512324 613 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.48□□□□□ -2.01
PTPN4P29074 Y_RNA.695-201ENST00000516715 107 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 RNU2-46P-201ENST00000517038 113 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTPN4P29074 AC007363.1-201ENST00000604736 620 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AL590808.1-201ENST00000618696 141 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 ADAM3A-203ENST00000461344 2157 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 AC093536.2-201ENST00000565257 1406 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
PTPN4P29074 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTPN4P29074 AC080128.1-201ENST00000474389 1917 ntBASIC2.48□□□□□ -2.01
PTPN4P29074 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.48□□□□□ -2.01
PTPN4P29074 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.47□□□□□ -2.01
PTPN4P29074 NACAP2-201ENST00000318548 624 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN4P29074 U8.3-201ENST00000363321 132 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 RNY1P12-201ENST00000364251 105 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 SNORA67.1-201ENST00000364749 141 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 RNU6-190P-201ENST00000384154 102 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 SNORD116-1-201ENST00000384335 95 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 MIR524-201ENST00000385242 87 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 RPL23AP32-201ENST00000395315 459 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 AC007283.2-201ENST00000424739 197 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 SKA2P1-201ENST00000425592 390 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN4P29074 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN4P29074 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN4P29074 USP9YP15-201ENST00000442391 422 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 MTND2P22-201ENST00000444325 1033 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.47□□□□□ -2.01
PTPN4P29074 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PTPN4P29074 AL033528.1-201ENST00000453780 140 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.47□□□□□ -2.01
PTPN4P29074 AL441985.1-201ENST00000457727 251 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.47□□□□□ -2.01
PTPN4P29074 AC090096.1-201ENST00000489168 390 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN4P29074 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
PTPN4P29074 RPL7P20-201ENST00000520308 745 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.47□□□□□ -2.01
PTPN4P29074 AP005136.1-201ENST00000579765 429 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 AC024619.4-201ENST00000580924 316 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 MIR3124-201ENST00000582636 67 ntBASIC2.47□□□□□ -2.01
PTPN4P29074 AC005771.1-201ENST00000585581 349 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms