Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC138623.1-201ENST00000418060 216 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.98□□□□□ -1.77
ATF4P18848 AL365496.1-201ENST00000426885 215 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC096644.2-201ENST00000429278 159 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC244670.1-201ENST00000436879 112 ntBASIC3.98□□□□□ -1.77
ATF4P18848 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.98□□□□□ -1.77
ATF4P18848 GPM6BP3-201ENST00000442797 145 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.98□□□□□ -1.77
ATF4P18848 AC112492.4-201ENST00000456549 352 ntBASIC3.98□□□□□ -1.77
ATF4P18848 RPS26P15-201ENST00000488067 348 ntBASIC3.98□□□□□ -1.77
ATF4P18848 RPS23P1-201ENST00000491662 432 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.98□□□□□ -1.77
ATF4P18848 IFITM8P-201ENST00000522529 394 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC022616.4-201ENST00000522985 181 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC115990.1-201ENST00000526957 301 ntBASIC3.98□□□□□ -1.77
ATF4P18848 HMGN2P6-201ENST00000551091 273 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.98□□□□□ -1.77
ATF4P18848 AC044860.2-201ENST00000561005 179 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.98□□□□□ -1.77
ATF4P18848 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.98□□□□□ -1.77
ATF4P18848 AL590392.1-201ENST00000604960 446 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC118658.2-201ENST00000618697 459 ntBASIC3.98□□□□□ -1.77
ATF4P18848 U2.1-201ENST00000618978 145 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC137590.2-201ENST00000619709 240 ntBASIC3.98□□□□□ -1.77
ATF4P18848 AC068870.2-201ENST00000620635 389 ntBASIC3.98□□□□□ -1.77
ATF4P18848 SCARNA4-201ENST00000629045 128 ntBASIC3.98□□□□□ -1.77
ATF4P18848 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.98□□□□□ -1.77
ATF4P18848 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.98□□□□□ -1.77
ATF4P18848 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATF4P18848 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATF4P18848 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATF4P18848 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATF4P18848 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ATF4P18848 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC092268.1-201ENST00000342691 405 ntBASIC3.97□□□□□ -1.77
ATF4P18848 RNA5SP507-201ENST00000363603 121 ntBASIC3.97□□□□□ -1.77
ATF4P18848 SNORA58B-201ENST00000364259 136 ntBASIC3.97□□□□□ -1.77
ATF4P18848 Y_RNA.645-201ENST00000391229 102 ntBASIC3.97□□□□□ -1.77
ATF4P18848 MIR937-201ENST00000401271 86 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AL357515.1-201ENST00000402967 542 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AL138878.1-201ENST00000405131 347 ntBASIC3.97□□□□□ -1.77
ATF4P18848 RN7SKP213-201ENST00000410746 298 ntBASIC3.97□□□□□ -1.77
ATF4P18848 RPL23AP26-201ENST00000412728 464 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.97□□□□□ -1.77
ATF4P18848 AL358453.1-201ENST00000422522 250 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AL139148.1-201ENST00000427122 680 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.97□□□□□ -1.77
ATF4P18848 RPL23AP75-201ENST00000491601 451 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.97□□□□□ -1.77
ATF4P18848 RNU6-911P-201ENST00000516523 104 ntBASIC3.97□□□□□ -1.77
ATF4P18848 RNU6-1046P-201ENST00000516538 107 ntBASIC3.97□□□□□ -1.77
ATF4P18848 RN7SKP272-201ENST00000516988 232 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.97□□□□□ -1.77
ATF4P18848 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.97□□□□□ -1.77
ATF4P18848 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.97□□□□□ -1.77
ATF4P18848 AL391813.1-201ENST00000603098 260 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC104695.3-201ENST00000604052 296 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.97□□□□□ -1.77
ATF4P18848 FAM27D1-201ENST00000612308 341 ntBASIC3.97□□□□□ -1.77
ATF4P18848 AC243829.7-201ENST00000633081 225 ntBASIC3.97□□□□□ -1.77
ATF4P18848 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.97□□□□□ -1.77
ATF4P18848 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ATF4P18848 MTND5P1-201ENST00000445440 1375 ntBASIC3.97□□□□□ -1.77
ATF4P18848 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
ATF4P18848 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
ATF4P18848 AC091152.2-201ENST00000591628 2569 ntBASIC3.97□□□□□ -1.77
ATF4P18848 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ATF4P18848 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
ATF4P18848 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
ATF4P18848 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.97□□□□□ -1.77
ATF4P18848 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
ATF4P18848 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.96□□□□□ -1.78
ATF4P18848 Y_RNA.152-201ENST00000363578 100 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RNA5SP335-201ENST00000363817 110 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RNY3P11-201ENST00000364153 102 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RNA5SP339-201ENST00000390987 122 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AL645927.1-201ENST00000396783 406 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.96□□□□□ -1.78
ATF4P18848 AC114482.1-201ENST00000418010 247 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.96□□□□□ -1.78
ATF4P18848 AL591419.1-201ENST00000427423 339 ntBASIC3.96□□□□□ -1.78
ATF4P18848 MTCO3P29-201ENST00000432119 779 ntBASIC3.96□□□□□ -1.78
ATF4P18848 ATP5HP2-201ENST00000433885 485 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC009296.1-201ENST00000443146 155 ntBASIC3.96□□□□□ -1.78
ATF4P18848 OR2AQ1P-201ENST00000451972 200 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RPS5P7-201ENST00000456664 608 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RNU7-87P-201ENST00000459343 62 ntBASIC3.96□□□□□ -1.78
ATF4P18848 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.96□□□□□ -1.78
ATF4P18848 RPL23AP65-201ENST00000475608 468 ntBASIC3.96□□□□□ -1.78
ATF4P18848 RPS4XP22-201ENST00000480755 780 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC091868.1-201ENST00000508746 304 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC006499.6-201ENST00000511169 607 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC091874.1-201ENST00000511402 339 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AC126177.5-201ENST00000549599 178 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.96□□□□□ -1.78
ATF4P18848 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.96□□□□□ -1.78
ATF4P18848 MIR5188-201ENST00000583467 113 ntBASIC3.96□□□□□ -1.78
ATF4P18848 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms