Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 FP236240.3-201ENST00000623061 327 ntBASIC3.99□□□□□ -1.77
COL6A2P12110 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL6A2P12110 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.99□□□□□ -1.77
COL6A2P12110 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL6A2P12110 AC007785.2-201ENST00000598627 1916 ntBASIC3.99□□□□□ -1.77
COL6A2P12110 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL6A2P12110 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL6A2P12110 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL6A2P12110 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL6A2P12110 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL6A2P12110 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.98□□□□□ -1.77
COL6A2P12110 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
COL6A2P12110 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 RPL9P7-201ENST00000330965 580 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
COL6A2P12110 SNORA31-201ENST00000362607 130 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 Y_RNA.153-201ENST00000363615 91 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 Y_RNA.176-201ENST00000363815 109 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 RN7SKP227-201ENST00000364445 330 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 MIR607-201ENST00000385241 96 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 MIR1302-3-201ENST00000408128 138 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.98□□□□□ -1.77
COL6A2P12110 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 AC114482.1-201ENST00000418010 247 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 MRPS18CP6-201ENST00000423587 223 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AC092047.1-201ENST00000424997 240 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 RPL21P66-201ENST00000426566 466 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AC007919.1-201ENST00000429380 217 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.98□□□□□ -1.77
COL6A2P12110 AL513043.1-201ENST00000439124 535 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 HMGB1P37-201ENST00000439613 609 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AL500522.2-201ENST00000448562 343 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 AC013470.1-201ENST00000453438 462 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AL583843.1-201ENST00000456070 346 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AC112492.4-201ENST00000456549 352 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AC091153.1-201ENST00000466297 402 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 RPL9P9-202ENST00000466501 579 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 RN7SL303P-201ENST00000469773 251 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 AC109479.2-201ENST00000517842 174 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 AP000889.1-201ENST00000530968 660 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.98□□□□□ -1.77
COL6A2P12110 MIR4273-201ENST00000582824 84 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 AC136601.2-201ENST00000604356 474 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 SNORD58B-201ENST00000607313 66 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.98□□□□□ -1.77
COL6A2P12110 U4.1-201ENST00000620349 87 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.98□□□□□ -1.77
COL6A2P12110 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
COL6A2P12110 NCAPGP1-201ENST00000505112 1814 ntBASIC3.98□□□□□ -1.77
COL6A2P12110 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.97□□□□□ -1.77
COL6A2P12110 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 Y_RNA.193-201ENST00000363979 102 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 AC068538.1-201ENST00000376856 336 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 RNU6-166P-201ENST00000384371 107 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 RNU6-933P-201ENST00000384424 107 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 AL138885.1-201ENST00000405921 675 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.97□□□□□ -1.77
COL6A2P12110 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.97□□□□□ -1.77
COL6A2P12110 RPS15AP10-201ENST00000432472 382 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 Z82210.1-201ENST00000440037 231 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.97□□□□□ -1.77
COL6A2P12110 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.97□□□□□ -1.77
COL6A2P12110 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.97□□□□□ -1.77
COL6A2P12110 RPL23AP45-201ENST00000476406 468 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 RN7SL604P-201ENST00000492589 296 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.97□□□□□ -1.77
COL6A2P12110 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.97□□□□□ -1.77
COL6A2P12110 AC136624.4-201ENST00000573044 370 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 AL356218.2-201ENST00000605264 187 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.97□□□□□ -1.77
COL6A2P12110 AC091812.1-201ENST00000432235 1948 ntBASIC3.97□□□□□ -1.77
COL6A2P12110 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
COL6A2P12110 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL6A2P12110 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL6A2P12110 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.77
COL6A2P12110 OTUD4P1-201ENST00000237841 3067 ntBASIC3.96□□□□□ -1.77
COL6A2P12110 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.96□□□□□ -1.78
COL6A2P12110 AC118273.1-201ENST00000525324 3006 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 Y_RNA.380-201ENST00000365663 111 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 RNU2-68P-201ENST00000410878 191 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.96□□□□□ -1.78
COL6A2P12110 AC108032.1-201ENST00000416706 207 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AL117339.3-201ENST00000418733 162 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.96□□□□□ -1.78
COL6A2P12110 AC083863.1-201ENST00000438811 231 ntBASIC3.96□□□□□ -1.78
COL6A2P12110 AL031274.1-201ENST00000450334 232 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms