Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 Y_RNA.687-201ENST00000516558 91 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-1212P-201ENST00000517023 104 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 MIR1273C-201ENST00000578669 77 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 LRRC37A5P-203ENST00000580181 585 ntBASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.5□□□□□ -1.53
CSB-PGBD3P0DP91 Y_RNA.183-201ENST00000363882 113 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 Y_RNA.269-201ENST00000364685 89 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-213P-201ENST00000384051 104 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-708P-201ENST00000384217 107 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 MIR625-201ENST00000385047 85 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 MIR1179-201ENST00000408703 91 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-607P-201ENST00000411283 108 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 Z85995.1-201ENST00000415547 335 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 NDUFB4P7-201ENST00000423198 363 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AL138752.1-201ENST00000452964 351 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC078817.1-201ENST00000492623 435 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC034114.1-201ENST00000520293 285 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC087369.1-201ENST00000520775 996 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AL157871.3-201ENST00000557231 293 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC006557.5-201ENST00000603126 811 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AL161756.2-201ENST00000604597 246 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AC012468.1-201ENST00000604888 430 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 MIR8069-1-201ENST00000616627 86 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 MIR8069-2-201ENST00000621412 86 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 AL450472.1-202ENST00000637286 180 ntBASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.49□□□□□ -1.53
CSB-PGBD3P0DP91 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 MIR335-201ENST00000362173 94 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 Y_RNA.54-201ENST00000362766 105 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-525P-201ENST00000363685 104 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 U3.42-201ENST00000408746 214 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AL353621.1-201ENST00000418219 243 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 TBCAP1-201ENST00000436520 327 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 RANP8-201ENST00000444720 713 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AC078918.1-201ENST00000498515 228 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 RNU4-71P-201ENST00000516258 113 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 RNA5SP360-201ENST00000516555 118 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 ATP5F1P5-201ENST00000526403 760 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AC004024.1-201ENST00000549244 247 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 RPS29P30-201ENST00000600975 111 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AL355877.2-201ENST00000603670 358 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-85P-201ENST00000605989 107 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AC005344.1-201ENST00000613391 459 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AC012314.7-201ENST00000619693 93 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 AP001642.1-201ENST00000624727 2117 ntBASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.48□□□□□ -1.53
CSB-PGBD3P0DP91 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AL391987.6-201ENST00000305671 199 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 Y_RNA.277-201ENST00000364754 102 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 RNU6-395P-201ENST00000365662 106 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 MIR30B-201ENST00000384850 88 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 SNORA57.3-201ENST00000411095 141 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AL030996.1-201ENST00000411430 235 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 RPL21P66-201ENST00000426566 466 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 PRSS3P4-201ENST00000453323 162 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AL160314.1-201ENST00000490836 438 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AC022493.1-201ENST00000492984 337 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 SNORA70.16-201ENST00000516390 95 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AL160281.1-201ENST00000605307 311 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 MIR6868-201ENST00000611215 58 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AC090132.2-201ENST00000615881 347 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 SNORD39.4-201ENST00000620099 78 ntBASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.47□□□□□ -1.53
CSB-PGBD3P0DP91 AL359854.1-201ENST00000614203 1594 ntBASIC5.46□□□□□ -1.53
CSB-PGBD3P0DP91 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.46□□□□□ -1.53
CSB-PGBD3P0DP91 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.33-201ENST00000362591 102 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 Y_RNA.200-201ENST00000364018 102 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-790P-201ENST00000384479 105 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 RN7SKP156-201ENST00000410308 342 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 RNU6-1140P-201ENST00000410517 106 ntBASIC5.46□□□□□ -1.54
CSB-PGBD3P0DP91 CYCSP33-201ENST00000414485 327 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms