Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 MIR3171-201ENST00000584270 74 ntBASIC3.59□□□□□ -1.83
RHOP08100 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.59□□□□□ -1.83
RHOP08100 CYP2C61P-201ENST00000604072 290 ntBASIC3.59□□□□□ -1.83
RHOP08100 AC080078.3-201ENST00000605407 463 ntBASIC3.59□□□□□ -1.83
RHOP08100 AL080274.1-201ENST00000605565 220 ntBASIC3.59□□□□□ -1.83
RHOP08100 AC084781.2-201ENST00000615568 161 ntBASIC3.59□□□□□ -1.83
RHOP08100 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.84
RHOP08100 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.59□□□□□ -1.84
RHOP08100 AC066616.2-201ENST00000559334 1481 ntBASIC3.59□□□□□ -1.84
RHOP08100 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RHOP08100 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RHOP08100 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RHOP08100 AC093908.1-201ENST00000623125 8092 ntBASIC3.58□□□□□ -1.84
RHOP08100 Z83843.1-201ENST00000604070 3685 ntBASIC3.58□□□□□ -1.84
RHOP08100 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.58□□□□□ -1.84
RHOP08100 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.58□□□□□ -1.84
RHOP08100 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.58□□□□□ -1.84
RHOP08100 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.58□□□□□ -1.84
RHOP08100 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RHOP08100 RNU6-562P-201ENST00000362731 107 ntBASIC3.58□□□□□ -1.84
RHOP08100 Y_RNA.111-201ENST00000363248 100 ntBASIC3.58□□□□□ -1.84
RHOP08100 Y_RNA.132-201ENST00000363421 102 ntBASIC3.58□□□□□ -1.84
RHOP08100 RNU6-1188P-201ENST00000363795 107 ntBASIC3.58□□□□□ -1.84
RHOP08100 RNA5SP42-201ENST00000364278 115 ntBASIC3.58□□□□□ -1.84
RHOP08100 RNU6-371P-201ENST00000364283 108 ntBASIC3.58□□□□□ -1.84
RHOP08100 RNU6-474P-201ENST00000384243 107 ntBASIC3.58□□□□□ -1.84
RHOP08100 MIR514A1-201ENST00000385133 98 ntBASIC3.58□□□□□ -1.84
RHOP08100 SNORA48.5-201ENST00000391143 135 ntBASIC3.58□□□□□ -1.84
RHOP08100 RPL5P18-201ENST00000406671 891 ntBASIC3.58□□□□□ -1.84
RHOP08100 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
RHOP08100 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.58□□□□□ -1.84
RHOP08100 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.58□□□□□ -1.84
RHOP08100 AL356535.1-201ENST00000440335 398 ntBASIC3.58□□□□□ -1.84
RHOP08100 ELOCP24-201ENST00000456370 334 ntBASIC3.58□□□□□ -1.84
RHOP08100 RPL21P41-201ENST00000459863 264 ntBASIC3.58□□□□□ -1.84
RHOP08100 AC027575.1-201ENST00000481064 460 ntBASIC3.58□□□□□ -1.84
RHOP08100 RPL21P13-201ENST00000488305 481 ntBASIC3.58□□□□□ -1.84
RHOP08100 MLLT10P2-201ENST00000506434 249 ntBASIC3.58□□□□□ -1.84
RHOP08100 APOOP4-201ENST00000513530 597 ntBASIC3.58□□□□□ -1.84
RHOP08100 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.58□□□□□ -1.84
RHOP08100 AC006557.5-201ENST00000603126 811 ntBASIC3.58□□□□□ -1.84
RHOP08100 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.58□□□□□ -1.84
RHOP08100 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RHOP08100 AL356274.2-201ENST00000624379 3752 ntBASIC3.58□□□□□ -1.84
RHOP08100 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RHOP08100 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RHOP08100 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHOP08100 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RHOP08100 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RHOP08100 Y_RNA.187-201ENST00000363918 113 ntBASIC3.57□□□□□ -1.84
RHOP08100 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 Y_RNA.480-201ENST00000384364 102 ntBASIC3.57□□□□□ -1.84
RHOP08100 Z98941.1-201ENST00000407764 100 ntBASIC3.57□□□□□ -1.84
RHOP08100 RPL21P109-201ENST00000422213 475 ntBASIC3.57□□□□□ -1.84
RHOP08100 Z82205.1-201ENST00000428456 297 ntBASIC3.57□□□□□ -1.84
RHOP08100 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 CEACAMP4-201ENST00000457676 421 ntBASIC3.57□□□□□ -1.84
RHOP08100 snoU13.4-201ENST00000458916 104 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC130509.1-201ENST00000464158 433 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC087884.1-201ENST00000469738 328 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC084357.1-201ENST00000473404 255 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 AC009901.1-201ENST00000506703 541 ntBASIC3.57□□□□□ -1.84
RHOP08100 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.57□□□□□ -1.84
RHOP08100 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHOP08100 Y_RNA.711-201ENST00000516993 102 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.57□□□□□ -1.84
RHOP08100 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.57□□□□□ -1.84
RHOP08100 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 MIR3921-201ENST00000577308 85 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.57□□□□□ -1.84
RHOP08100 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 AL360085.1-201ENST00000604713 532 ntBASIC3.57□□□□□ -1.84
RHOP08100 AL162730.1-201ENST00000605734 292 ntBASIC3.57□□□□□ -1.84
RHOP08100 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.57□□□□□ -1.84
RHOP08100 AF127577.6-201ENST00000623352 2191 ntBASIC3.57□□□□□ -1.84
RHOP08100 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RHOP08100 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RHOP08100 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
RHOP08100 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
RHOP08100 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHOP08100 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHOP08100 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RHOP08100 MIR369-201ENST00000362155 70 ntBASIC3.56□□□□□ -1.84
RHOP08100 RNU6-50P-201ENST00000362356 103 ntBASIC3.56□□□□□ -1.84
RHOP08100 RNA5SP374-201ENST00000362939 125 ntBASIC3.56□□□□□ -1.84
RHOP08100 SNORD6-201ENST00000365444 73 ntBASIC3.56□□□□□ -1.84
RHOP08100 MIR559-201ENST00000385188 96 ntBASIC3.56□□□□□ -1.84
RHOP08100 RHEBP3-201ENST00000411920 351 ntBASIC3.56□□□□□ -1.84
RHOP08100 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RHOP08100 MTND2P23-201ENST00000422990 651 ntBASIC3.56□□□□□ -1.84
RHOP08100 AC006028.1-201ENST00000438379 402 ntBASIC3.56□□□□□ -1.84
RHOP08100 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms