Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RN7SKP219-201ENST00000516825 296 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC005832.3-201ENST00000537929 631 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC126365.2-201ENST00000580630 379 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC009974.1-201ENST00000608881 455 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AL391813.2-201ENST00000609113 322 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AL773524.1-201ENST00000614065 229 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AC138627.2-201ENST00000624202 601 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 AP003485.1-201ENST00000625093 753 ntBASIC1.41□□□□□ -2.18
HLA-DQB2P05538 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
HLA-DQB2P05538 RNU6-188P-201ENST00000364207 107 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 SNORA25B-201ENST00000365507 128 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 MIR518A2-201ENST00000384966 87 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AL590084.1-201ENST00000407885 387 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 HMGB1P18-201ENST00000438801 619 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AL161788.1-201ENST00000441805 169 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 RPL23AP76-201ENST00000441860 458 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 CYP2C59P-201ENST00000457790 269 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 FO393415.2-201ENST00000480085 343 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC011005.2-201ENST00000487324 359 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC024589.1-201ENST00000512207 263 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC091965.2-201ENST00000512324 613 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 SNORA48.11-201ENST00000517015 89 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC021451.1-201ENST00000523498 1129 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AP004607.1-201ENST00000524456 203 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC093012.1-202ENST00000549403 582 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 HSBP1P1-201ENST00000555205 166 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AL133153.1-201ENST00000557756 303 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AL132657.2-201ENST00000564417 358 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AC012213.3-201ENST00000577199 777 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 AP002802.2-201ENST00000605877 235 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.4□□□□□ -2.19
HLA-DQB2P05538 RNU6-512P-201ENST00000364438 103 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 SNORA40.2-201ENST00000390847 128 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AL359634.1-202ENST00000404721 284 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 RPL21P24-201ENST00000413752 448 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 OR51A5P-201ENST00000415429 942 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 VN1R108P-201ENST00000431580 830 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC140059.1-201ENST00000489238 361 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 SNORA31.3-201ENST00000516029 96 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 RNU6-1183P-201ENST00000517054 60 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC034114.1-201ENST00000520293 285 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 LINC00933-203ENST00000559812 219 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AL713866.2-201ENST00000603579 219 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 MIR6134-201ENST00000617606 109 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC013470.4-201ENST00000619978 986 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC104985.3-201ENST00000623479 597 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 AC097655.1-201ENST00000635075 318 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DQB2P05538 ZNF209P-201ENST00000593450 2304 ntBASIC1.39□□□□□ -2.19
HLA-DQB2P05538 ZNF72P-201ENST00000425869 1908 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 DDX43P2-201ENST00000604753 1354 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 SNORA8-201ENST00000384574 139 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL591034.2-201ENST00000402839 359 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC244636.1-201ENST00000421152 228 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL953862.1-201ENST00000423016 168 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL353706.1-201ENST00000436728 494 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 RSU1P2-202ENST00000437884 485 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 MTCO1P53-201ENST00000441633 699 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 MTND6P13-201ENST00000443510 523 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 MTCYBP18-201ENST00000501056 747 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC104685.1-201ENST00000502445 371 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC096745.1-201ENST00000509945 370 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AC023813.2-201ENST00000564321 469 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 AL512347.1-201ENST00000566420 503 ntBASIC1.38□□□□□ -2.19
HLA-DQB2P05538 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms