Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNA5SP67-201ENST00000516422 131 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.14□□□□□ -2.39
APOBP04114 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
APOBP04114 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.14□□□□□ -2.39
APOBP04114 MIR767-201ENST00000390228 109 ntBASIC0.14□□□□□ -2.39
APOBP04114 HMGB1P17-201ENST00000403495 628 ntBASIC0.14□□□□□ -2.39
APOBP04114 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.14□□□□□ -2.39
APOBP04114 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.14□□□□□ -2.39
APOBP04114 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 MED14P1-201ENST00000430517 648 ntBASIC0.14□□□□□ -2.39
APOBP04114 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.14□□□□□ -2.39
APOBP04114 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 CR769776.1-201ENST00000441254 787 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 AC011155.2-201ENST00000623202 216 ntBASIC0.14□□□□□ -2.39
APOBP04114 AP002791.1-201ENST00000623291 381 ntBASIC0.14□□□□□ -2.39
APOBP04114 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.14□□□□□ -2.39
APOBP04114 RNU1-96P-201ENST00000364163 162 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.14□□□□□ -2.39
APOBP04114 AC098592.2-201ENST00000413158 265 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC245047.4-201ENST00000433189 144 ntBASIC0.14□□□□□ -2.39
APOBP04114 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.14□□□□□ -2.39
APOBP04114 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.14□□□□□ -2.39
APOBP04114 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.14□□□□□ -2.39
APOBP04114 AC021171.1-201ENST00000603137 706 ntBASIC0.14□□□□□ -2.39
APOBP04114 AC080013.4-201ENST00000607624 649 ntBASIC0.14□□□□□ -2.39
APOBP04114 Y_RNA.18-201ENST00000362461 102 ntBASIC0.13□□□□□ -2.39
APOBP04114 HNRNPDP2-201ENST00000406475 478 ntBASIC0.13□□□□□ -2.39
APOBP04114 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.13□□□□□ -2.39
APOBP04114 MTCO1P3-201ENST00000429327 192 ntBASIC0.13□□□□□ -2.39
APOBP04114 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.13□□□□□ -2.39
APOBP04114 COX7A2P2-201ENST00000505291 250 ntBASIC0.13□□□□□ -2.39
APOBP04114 RN7SKP5-201ENST00000517045 272 ntBASIC0.13□□□□□ -2.39
APOBP04114 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.13□□□□□ -2.39
APOBP04114 AC022690.1-201ENST00000526681 550 ntBASIC0.13□□□□□ -2.39
APOBP04114 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
APOBP04114 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.13□□□□□ -2.39
APOBP04114 RNU2-63P-201ENST00000410792 194 ntBASIC0.13□□□□□ -2.39
APOBP04114 AL669831.1-202ENST00000428504 417 ntBASIC0.13□□□□□ -2.39
APOBP04114 GTF2IP13-201ENST00000438487 386 ntBASIC0.13□□□□□ -2.39
APOBP04114 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.13□□□□□ -2.39
APOBP04114 HMGB1P35-201ENST00000503360 598 ntBASIC0.13□□□□□ -2.39
APOBP04114 AC147055.4-201ENST00000504399 745 ntBASIC0.13□□□□□ -2.39
APOBP04114 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
APOBP04114 RNU6-1004P-201ENST00000516584 111 ntBASIC0.13□□□□□ -2.39
APOBP04114 AC016925.2-201ENST00000605108 242 ntBASIC0.13□□□□□ -2.39
APOBP04114 FARSBP1-201ENST00000435808 1778 ntBASIC0.13□□□□□ -2.39
APOBP04114 MIR153-2-201ENST00000385225 87 ntBASIC0.13□□□□□ -2.39
APOBP04114 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.13□□□□□ -2.39
APOBP04114 AC096920.1-201ENST00000423991 241 ntBASIC0.13□□□□□ -2.39
APOBP04114 RSU1P2-202ENST00000437884 485 ntBASIC0.13□□□□□ -2.39
APOBP04114 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.13□□□□□ -2.39
APOBP04114 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.13□□□□□ -2.39
APOBP04114 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.13□□□□□ -2.39
APOBP04114 AC110792.3-201ENST00000595906 1614 ntBASIC0.13□□□□□ -2.39
APOBP04114 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
APOBP04114 OFD1P18Y-201ENST00000420889 959 ntBASIC0.13□□□□□ -2.39
APOBP04114 snoU13.4-201ENST00000458916 104 ntBASIC0.13□□□□□ -2.39
APOBP04114 Y_RNA.654-201ENST00000497848 106 ntBASIC0.13□□□□□ -2.39
APOBP04114 OR1M4P-201ENST00000589199 287 ntBASIC0.13□□□□□ -2.39
APOBP04114 AC123767.1-202ENST00000620407 817 ntBASIC0.13□□□□□ -2.39
APOBP04114 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.13□□□□□ -2.39
APOBP04114 AC016716.1-201ENST00000265882 708 ntBASIC0.12□□□□□ -2.39
APOBP04114 RNA5SP361-201ENST00000362686 118 ntBASIC0.12□□□□□ -2.39
APOBP04114 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
APOBP04114 AL365496.1-201ENST00000426885 215 ntBASIC0.12□□□□□ -2.39
APOBP04114 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.12□□□□□ -2.39
APOBP04114 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.12□□□□□ -2.39
APOBP04114 RNU6-322P-201ENST00000516010 103 ntBASIC0.12□□□□□ -2.39
APOBP04114 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.12□□□□□ -2.39
APOBP04114 AL359212.1-201ENST00000556608 614 ntBASIC0.12□□□□□ -2.39
APOBP04114 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.12□□□□□ -2.39
APOBP04114 AC005668.1-201ENST00000571142 476 ntBASIC0.12□□□□□ -2.39
APOBP04114 Y_RNA.757-201ENST00000578934 114 ntBASIC0.12□□□□□ -2.39
APOBP04114 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.12□□□□□ -2.39
APOBP04114 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.12□□□□□ -2.39
APOBP04114 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
APOBP04114 DYNLT3P2-201ENST00000442517 295 ntBASIC0.12□□□□□ -2.39
APOBP04114 MTND6P13-201ENST00000443510 523 ntBASIC0.12□□□□□ -2.39
APOBP04114 SNORA31.8-201ENST00000516327 108 ntBASIC0.12□□□□□ -2.39
APOBP04114 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.12□□□□□ -2.39
APOBP04114 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.12□□□□□ -2.39
APOBP04114 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.12□□□□□ -2.39
APOBP04114 AC141557.1-201ENST00000540982 400 ntBASIC0.12□□□□□ -2.39
APOBP04114 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.12□□□□□ -2.39
APOBP04114 AC011260.1-201ENST00000578420 472 ntBASIC0.12□□□□□ -2.39
APOBP04114 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.12□□□□□ -2.39
APOBP04114 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.12□□□□□ -2.39
APOBP04114 MTND4LP21-201ENST00000415303 295 ntBASIC0.12□□□□□ -2.39
APOBP04114 SFR1P2-201ENST00000421841 730 ntBASIC0.12□□□□□ -2.39
APOBP04114 MTND5P14-201ENST00000441481 1267 ntBASIC0.12□□□□□ -2.39
APOBP04114 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
APOBP04114 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.12□□□□□ -2.39
APOBP04114 RNU2-19P-201ENST00000517288 84 ntBASIC0.12□□□□□ -2.39
APOBP04114 AL133241.1-201ENST00000556832 487 ntBASIC0.12□□□□□ -2.39
APOBP04114 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.11□□□□□ -2.39
APOBP04114 Y_RNA.552-201ENST00000384665 112 ntBASIC0.11□□□□□ -2.39
APOBP04114 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.11□□□□□ -2.39
APOBP04114 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms