Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU6-201P-201ENST00000517100 61 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.74□□□□□ -2.13
MT-ND4P03905 CBX3P7-201ENST00000532876 502 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.74□□□□□ -2.13
MT-ND4P03905 AC009063.1-201ENST00000563342 702 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AP001981.2-201ENST00000603241 418 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.6-201ENST00000603753 252 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.11-201ENST00000604059 253 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC104763.2-201ENST00000604179 382 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC008162.1-201ENST00000604718 254 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.1-201ENST00000604752 252 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.5-201ENST00000605253 252 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.12-201ENST00000605291 253 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.8-201ENST00000605353 252 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL670379.7-201ENST00000605823 252 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 TUSC7.1-201ENST00000610969 165 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 MIR6134-201ENST00000617606 109 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC024581.2-201ENST00000619986 252 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AP002782.1-201ENST00000623107 614 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.74□□□□□ -2.13
MT-ND4P03905 MTND5P42-201ENST00000637720 498 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
MT-ND4P03905 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.74□□□□□ -2.13
MT-ND4P03905 CDC27P3-201ENST00000635418 1910 ntBASIC1.74□□□□□ -2.13
MT-ND4P03905 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.73□□□□□ -2.13
MT-ND4P03905 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MT-ND4P03905 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
MT-ND4P03905 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
MT-ND4P03905 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MT-ND4P03905 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
MT-ND4P03905 RNU6-809P-201ENST00000384461 107 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 Y_RNA.534-201ENST00000384599 112 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 U6atac.2-201ENST00000408644 118 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 RNU2-62P-201ENST00000410868 191 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AL030996.1-201ENST00000411430 235 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 RPS3AP44-201ENST00000425466 790 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AC027124.2-201ENST00000428249 105 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.73□□□□□ -2.13
MT-ND4P03905 AL354941.1-201ENST00000438600 464 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 HMGB3P12-201ENST00000438745 556 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.73□□□□□ -2.13
MT-ND4P03905 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.73□□□□□ -2.13
MT-ND4P03905 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
MT-ND4P03905 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.73□□□□□ -2.13
MT-ND4P03905 SNORD97-201ENST00000459187 142 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.73□□□□□ -2.13
MT-ND4P03905 RNU6-572P-201ENST00000516724 80 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 MTND2P32-201ENST00000521584 1038 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.73□□□□□ -2.13
MT-ND4P03905 AL133241.1-201ENST00000556832 487 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
MT-ND4P03905 MIR4287-201ENST00000579398 78 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.73□□□□□ -2.13
MT-ND4P03905 MIR4672-201ENST00000583126 81 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AP000811.1-201ENST00000603803 651 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AC011458.1-201ENST00000604034 617 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
MT-ND4P03905 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
MT-ND4P03905 AC006338.1-201ENST00000618453 749 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 AL512643.1-201ENST00000635735 524 ntBASIC1.73□□□□□ -2.13
MT-ND4P03905 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.72□□□□□ -2.13
MT-ND4P03905 HSPA8P4-201ENST00000511877 1920 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.72□□□□□ -2.13
MT-ND4P03905 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
MT-ND4P03905 RNU6-486P-201ENST00000363116 107 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 SNORA4.3-201ENST00000365564 137 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 RNU5E-6P-201ENST00000365574 115 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 RNU6-898P-201ENST00000365627 104 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 XGY1-201ENST00000381172 446 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 RN7SKP158-201ENST00000410453 326 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC092809.3-201ENST00000415453 231 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.72□□□□□ -2.13
MT-ND4P03905 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.72□□□□□ -2.13
MT-ND4P03905 AL591212.2-201ENST00000433923 257 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.72□□□□□ -2.13
MT-ND4P03905 RPL37P21-201ENST00000435890 276 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND4P03905 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND4P03905 RNU6-953P-201ENST00000459154 107 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.72□□□□□ -2.13
MT-ND4P03905 AC011005.2-201ENST00000487324 359 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND4P03905 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC116655.1-201ENST00000508324 901 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 MRPS17P9-201ENST00000511924 393 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 SMURF2P1-201ENST00000514992 481 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.72□□□□□ -2.13
MT-ND4P03905 RNA5SP112-201ENST00000515937 99 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 ACA59.2-201ENST00000517061 156 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC022616.6-201ENST00000520479 119 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC118273.2-201ENST00000532092 465 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.72□□□□□ -2.13
MT-ND4P03905 MIR4782-201ENST00000577987 79 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 MIR3118-1-201ENST00000581787 76 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AL109918.3-201ENST00000603072 338 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 MTCYBP22-201ENST00000603788 447 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC144521.1-201ENST00000607148 956 ntBASIC1.72□□□□□ -2.13
MT-ND4P03905 AC022893.3-201ENST00000607665 437 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms