Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NDUFA8P1-201ENST00000605525 367 ntBASIC1.51□□□□□ -2.17
APOEP02649 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
APOEP02649 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.51□□□□□ -2.17
APOEP02649 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
APOEP02649 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
APOEP02649 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
APOEP02649 MIR378A-201ENST00000362177 66 ntBASIC1.5□□□□□ -2.17
APOEP02649 RNU4-13P-201ENST00000364019 141 ntBASIC1.5□□□□□ -2.17
APOEP02649 RNU6-512P-201ENST00000364438 103 ntBASIC1.5□□□□□ -2.17
APOEP02649 RNU6-1032P-201ENST00000384100 107 ntBASIC1.5□□□□□ -2.17
APOEP02649 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.5□□□□□ -2.17
APOEP02649 AC074117.2-201ENST00000417130 397 ntBASIC1.5□□□□□ -2.17
APOEP02649 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.5□□□□□ -2.17
APOEP02649 MTCO3P46-201ENST00000425787 232 ntBASIC1.5□□□□□ -2.17
APOEP02649 RPL7P34-201ENST00000433316 712 ntBASIC1.5□□□□□ -2.17
APOEP02649 MTND1P31-201ENST00000449206 961 ntBASIC1.5□□□□□ -2.17
APOEP02649 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.5□□□□□ -2.17
APOEP02649 RPL18AP17-201ENST00000455326 198 ntBASIC1.5□□□□□ -2.17
APOEP02649 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.5□□□□□ -2.17
APOEP02649 AC010631.1-201ENST00000474150 156 ntBASIC1.5□□□□□ -2.17
APOEP02649 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.5□□□□□ -2.17
APOEP02649 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.5□□□□□ -2.17
APOEP02649 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
APOEP02649 AC110760.3-202ENST00000515177 371 ntBASIC1.5□□□□□ -2.17
APOEP02649 SNORA48.11-201ENST00000517015 89 ntBASIC1.5□□□□□ -2.17
APOEP02649 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
APOEP02649 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.5□□□□□ -2.17
APOEP02649 AC026616.1-201ENST00000523157 525 ntBASIC1.5□□□□□ -2.17
APOEP02649 AC079598.5-201ENST00000547460 117 ntBASIC1.5□□□□□ -2.17
APOEP02649 MRPS36P5-201ENST00000551909 298 ntBASIC1.5□□□□□ -2.17
APOEP02649 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.5□□□□□ -2.17
APOEP02649 AC091057.3-201ENST00000602684 733 ntBASIC1.5□□□□□ -2.17
APOEP02649 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.5□□□□□ -2.17
APOEP02649 ZNF209P-201ENST00000593450 2304 ntBASIC1.5□□□□□ -2.17
APOEP02649 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.5□□□□□ -2.17
APOEP02649 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.49□□□□□ -2.17
APOEP02649 SNORD115-3-201ENST00000363100 82 ntBASIC1.49□□□□□ -2.17
APOEP02649 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.49□□□□□ -2.17
APOEP02649 AL449283.1-202ENST00000418249 604 ntBASIC1.49□□□□□ -2.17
APOEP02649 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
APOEP02649 USP9YP26-201ENST00000421008 661 ntBASIC1.49□□□□□ -2.17
APOEP02649 C1DP1-201ENST00000426049 402 ntBASIC1.49□□□□□ -2.17
APOEP02649 AC244035.1-201ENST00000430042 390 ntBASIC1.49□□□□□ -2.17
APOEP02649 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.49□□□□□ -2.17
APOEP02649 MTND5P14-201ENST00000441481 1267 ntBASIC1.49□□□□□ -2.17
APOEP02649 SNRPGP13-201ENST00000442212 177 ntBASIC1.49□□□□□ -2.17
APOEP02649 RN7SKP210-201ENST00000459176 261 ntBASIC1.49□□□□□ -2.17
APOEP02649 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.49□□□□□ -2.17
APOEP02649 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.49□□□□□ -2.17
APOEP02649 MTCYBP16-201ENST00000509187 1129 ntBASIC1.49□□□□□ -2.17
APOEP02649 RNU6-1225P-201ENST00000516336 65 ntBASIC1.49□□□□□ -2.17
APOEP02649 RNU6-678P-201ENST00000516832 109 ntBASIC1.49□□□□□ -2.17
APOEP02649 RNU6-334P-201ENST00000517072 102 ntBASIC1.49□□□□□ -2.17
APOEP02649 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.49□□□□□ -2.17
APOEP02649 AP004607.1-201ENST00000524456 203 ntBASIC1.49□□□□□ -2.17
APOEP02649 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.49□□□□□ -2.17
APOEP02649 AL161670.1-201ENST00000554348 137 ntBASIC1.49□□□□□ -2.17
APOEP02649 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
APOEP02649 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.49□□□□□ -2.17
APOEP02649 AC018638.7-201ENST00000605836 1114 ntBASIC1.49□□□□□ -2.17
APOEP02649 AC092953.2-201ENST00000608000 699 ntBASIC1.49□□□□□ -2.17
APOEP02649 AC092192.1-201ENST00000633154 1018 ntBASIC1.49□□□□□ -2.17
APOEP02649 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.49□□□□□ -2.17
APOEP02649 RNU6-223P-201ENST00000362830 107 ntBASIC1.48□□□□□ -2.17
APOEP02649 RNA5SP212-201ENST00000391223 107 ntBASIC1.48□□□□□ -2.17
APOEP02649 AL603865.2-201ENST00000401679 213 ntBASIC1.48□□□□□ -2.17
APOEP02649 USP9YP6-201ENST00000413550 854 ntBASIC1.48□□□□□ -2.17
APOEP02649 AL353621.1-201ENST00000418219 243 ntBASIC1.48□□□□□ -2.17
APOEP02649 ISCA1P1-201ENST00000426679 387 ntBASIC1.48□□□□□ -2.17
APOEP02649 RPS15AP9-201ENST00000439856 381 ntBASIC1.48□□□□□ -2.17
APOEP02649 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.48□□□□□ -2.17
APOEP02649 AL137159.1-201ENST00000452808 512 ntBASIC1.48□□□□□ -2.17
APOEP02649 AL441985.1-201ENST00000457727 251 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC117503.1-201ENST00000472241 394 ntBASIC1.48□□□□□ -2.17
APOEP02649 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
APOEP02649 RNU6-1183P-201ENST00000517054 60 ntBASIC1.48□□□□□ -2.17
APOEP02649 ACA59.2-201ENST00000517061 156 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.48□□□□□ -2.17
APOEP02649 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.48□□□□□ -2.17
APOEP02649 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.48□□□□□ -2.17
APOEP02649 AC023538.1-201ENST00000534576 736 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.48□□□□□ -2.17
APOEP02649 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC022254.1-201ENST00000567857 235 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC104072.1-201ENST00000568817 668 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC026271.5-201ENST00000577873 130 ntBASIC1.48□□□□□ -2.17
APOEP02649 MIR4713-201ENST00000582691 75 ntBASIC1.48□□□□□ -2.17
APOEP02649 VN1R80P-201ENST00000597126 338 ntBASIC1.48□□□□□ -2.17
APOEP02649 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.48□□□□□ -2.17
APOEP02649 AC012467.1-201ENST00000607740 256 ntBASIC1.48□□□□□ -2.17
APOEP02649 AL356094.1-201ENST00000624663 1212 ntBASIC1.48□□□□□ -2.17
APOEP02649 LINC02211-204ENST00000642024 1070 ntBASIC1.48□□□□□ -2.17
APOEP02649 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.48□□□□□ -2.17
APOEP02649 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
APOEP02649 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.47□□□□□ -2.17
APOEP02649 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
APOEP02649 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
APOEP02649 MIR1283-2-201ENST00000408621 87 ntBASIC1.47□□□□□ -2.17
APOEP02649 OR51A5P-201ENST00000415429 942 ntBASIC1.47□□□□□ -2.17
APOEP02649 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms