Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNRPGP17-201ENST00000603780 214 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AC103710.4-201ENST00000609301 899 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AL161423.1-201ENST00000613700 262 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 TPTE2P4-201ENST00000258589 1605 ntBASIC0.45□□□□□ -2.34
SPTA1P02549 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 EIF4EP4-201ENST00000424916 578 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC245047.4-201ENST00000433189 144 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 AL354941.1-201ENST00000438600 464 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 AP003327.1-201ENST00000529684 127 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.44□□□□□ -2.34
SPTA1P02549 MIR4765-201ENST00000585007 77 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 OR1M4P-201ENST00000589199 287 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 PRR13P7-201ENST00000605538 430 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.44□□□□□ -2.34
SPTA1P02549 AC010329.5-201ENST00000623497 2174 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 U8.14-201ENST00000390843 143 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 U6atac.2-201ENST00000408644 118 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 MTCO1P53-201ENST00000441633 699 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 RNF138P1-201ENST00000502765 546 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC091435.1-201ENST00000505442 584 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 RNU6-798P-201ENST00000516912 103 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC104997.1-201ENST00000519761 717 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.44□□□□□ -2.34
SPTA1P02549 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.44□□□□□ -2.34
SPTA1P02549 AC105036.1-201ENST00000566222 271 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC025588.2-201ENST00000604851 466 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC104763.3-201ENST00000613765 618 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC106800.4-201ENST00000614905 153 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 AC025588.4-201ENST00000615802 908 ntBASIC0.44□□□□□ -2.34
SPTA1P02549 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.44□□□□□ -2.34
SPTA1P02549 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 UBE2FP1-201ENST00000416536 447 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AL034418.1-201ENST00000448675 860 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.43□□□□□ -2.34
SPTA1P02549 AC079140.2-201ENST00000506193 142 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.43□□□□□ -2.34
SPTA1P02549 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.43□□□□□ -2.34
SPTA1P02549 RRN3P3-201ENST00000549207 578 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 MTCYBP27-201ENST00000555160 670 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AP003400.5-201ENST00000624827 617 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 SNORA4.3-201ENST00000365564 137 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 MIR934-201ENST00000401241 83 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.43□□□□□ -2.34
SPTA1P02549 RNU2-7P-201ENST00000410794 178 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 BEND7P1-201ENST00000422058 457 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AC093106.2-201ENST00000428212 385 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.43□□□□□ -2.34
SPTA1P02549 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.43□□□□□ -2.34
SPTA1P02549 RPL23AP3-201ENST00000453844 468 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 RPL31P53-201ENST00000457065 348 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AC134050.1-201ENST00000495088 933 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.43□□□□□ -2.34
SPTA1P02549 AC093770.1-201ENST00000511559 571 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 RNA5SP67-201ENST00000516422 131 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 AC136932.1-201ENST00000574771 208 ntBASIC0.43□□□□□ -2.34
SPTA1P02549 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
SPTA1P02549 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.42□□□□□ -2.34
SPTA1P02549 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 RNU6-1164P-201ENST00000364428 107 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 MIR604-201ENST00000384880 94 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
SPTA1P02549 TAAR7P-201ENST00000436141 242 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.42□□□□□ -2.34
SPTA1P02549 RNU7-23P-201ENST00000459465 62 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SPTA1P02549 SCARNA3-201ENST00000517097 143 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTA1P02549 FAM60CP-201ENST00000591086 664 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AC010738.1-201ENST00000604970 987 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AC013468.1-201ENST00000608680 598 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AC006213.4-201ENST00000616184 634 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTA1P02549 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
SPTA1P02549 RNU6-1243P-201ENST00000364028 107 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 Y_RNA.552-201ENST00000384665 112 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 RNU11-3P-201ENST00000391111 133 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 SNX3P1X-201ENST00000414887 175 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 NDUFA5P10-201ENST00000432147 357 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 DYNLT3P2-201ENST00000442517 295 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTA1P02549 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.42□□□□□ -2.34
SPTA1P02549 HMGN2P9-201ENST00000476875 229 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AC104057.1-201ENST00000515547 497 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AC034114.1-201ENST00000520293 285 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AP001269.3-201ENST00000588718 329 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 AC024060.1-201ENST00000607052 494 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 uc_338.14-201ENST00000613162 166 ntBASIC0.42□□□□□ -2.34
SPTA1P02549 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.42□□□□□ -2.34
SPTA1P02549 AL049737.1-201ENST00000413920 1403 ntBASIC0.41□□□□□ -2.34
SPTA1P02549 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms