Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC024619.4-201ENST00000580924 316 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 VN1R83P-201ENST00000595685 445 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 VN1R107P-201ENST00000601784 209 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 DUXAP10-204ENST00000612052 616 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AC009090.3-201ENST00000616553 565 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 AL356596.1-201ENST00000624230 379 ntBASIC1.32□□□□□ -2.2
COL4A1P02462 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.31□□□□□ -2.2
COL4A1P02462 AC005832.2-201ENST00000538921 1430 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
COL4A1P02462 SNORA62.1-201ENST00000364287 154 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 RNU4-38P-201ENST00000364472 129 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 MIR325-201ENST00000385260 98 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 RPS4XP3-201ENST00000398541 413 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 RNU4-22P-201ENST00000411058 166 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 MTCO2P21-201ENST00000419780 677 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 PGBD4P6-201ENST00000421501 610 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 MTCO2P23-201ENST00000425216 680 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.31□□□□□ -2.2
COL4A1P02462 AL365496.1-201ENST00000426885 215 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A1P02462 AL358794.1-201ENST00000445689 381 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AC002381.1-201ENST00000447049 280 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 ARPC3P5-201ENST00000448802 534 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 MTND1P16-201ENST00000465177 898 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 RNU6-405P-201ENST00000516637 110 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 RNU6-798P-201ENST00000516912 103 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AL121821.2-201ENST00000556081 394 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A1P02462 AC022662.1-201ENST00000580252 331 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AL353997.4-201ENST00000586196 166 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AL139344.1-201ENST00000605228 195 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AL592221.1-201ENST00000605266 382 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 SNORD114-21-201ENST00000606412 72 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 RNU6-88P-201ENST00000606801 100 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.31□□□□□ -2.2
COL4A1P02462 AL157392.4-201ENST00000609756 345 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AC023158.2-201ENST00000614876 543 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AL109620.1-201ENST00000618738 1197 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 MIR6130-201ENST00000619419 109 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AC068880.5-201ENST00000624331 290 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AC010608.3-201ENST00000625048 527 ntBASIC1.31□□□□□ -2.2
COL4A1P02462 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
COL4A1P02462 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
COL4A1P02462 SNORA18.2-201ENST00000383865 132 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 Y_RNA.393-201ENST00000383936 102 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 RNU6-114P-201ENST00000384704 105 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 RNU6-278P-201ENST00000390945 109 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 RNA5SP252-201ENST00000391131 119 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 MTATP6P20-201ENST00000414147 562 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 MTCYBP38-201ENST00000417160 1123 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.3□□□□□ -2.2
COL4A1P02462 SNRPEP10-201ENST00000420249 274 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 BX119904.4-201ENST00000424402 301 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AL592447.1-201ENST00000447592 540 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AL031313.1-201ENST00000448435 256 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 PSPHP1-201ENST00000450062 261 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 MTND1P9-201ENST00000453775 944 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 MEMO1P3-201ENST00000459811 302 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 RPL30P14-201ENST00000482744 348 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A1P02462 FABP5P5-201ENST00000515537 406 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 RNY4P37-201ENST00000516225 96 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AP003497.1-201ENST00000528472 562 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A1P02462 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
COL4A1P02462 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A1P02462 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A1P02462 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.3□□□□□ -2.2
COL4A1P02462 AP001269.3-201ENST00000588718 329 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 U73023.1-201ENST00000603134 700 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AC016727.2-201ENST00000603988 621 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 RNU4-5P-201ENST00000607255 135 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AC107214.2-201ENST00000608204 634 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 FTX_3.1-201ENST00000610451 147 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AC097478.2-201ENST00000610572 514 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AC005332.10-201ENST00000612725 619 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AP000676.3-201ENST00000623299 569 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 AL390862.1-201ENST00000635467 1469 ntBASIC1.3□□□□□ -2.2
COL4A1P02462 ZNF29P-201ENST00000225587 168 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
COL4A1P02462 RNU1-62P-201ENST00000362599 164 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 RNU5D-1-201ENST00000363299 116 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 RNU1-133P-201ENST00000364867 167 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A1P02462 RNU6-413P-201ENST00000384115 107 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MIR122-201ENST00000385044 85 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 MIR620-201ENST00000385232 95 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 RNU6-584P-201ENST00000410350 95 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AC106883.1-201ENST00000418805 562 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 HSFY7P-201ENST00000432672 318 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 HSFY8P-201ENST00000437934 318 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.29□□□□□ -2.2
COL4A1P02462 HSFY5P-201ENST00000453726 309 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 snoU13.8-201ENST00000458890 104 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A1P02462 AC147055.4-201ENST00000504399 745 ntBASIC1.29□□□□□ -2.2
COL4A1P02462 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms